Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 AC016734.2-201ENST00000624325 1377 ntBASIC21.07■□□□□ 0.96
RNF20Q5VTR2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF20Q5VTR2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 AL845331.1-201ENST00000424978 1190 ntBASIC21.06■□□□□ 0.96
RNF20Q5VTR2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 AC007967.3-201ENST00000434308 558 ntBASIC21.06■□□□□ 0.96
RNF20Q5VTR2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 AC002558.1-201ENST00000488906 803 ntBASIC21.06■□□□□ 0.96
RNF20Q5VTR2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 AL138831.2-201ENST00000606564 490 ntBASIC21.06■□□□□ 0.96
RNF20Q5VTR2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 AL645608.8-201ENST00000606034 2086 ntBASIC21.06■□□□□ 0.96
RNF20Q5VTR2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF20Q5VTR2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 IER3-202ENST00000376377 1350 ntBASIC21.05■□□□□ 0.96
RNF20Q5VTR2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF20Q5VTR2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 TSSC2-201ENST00000450217 709 ntBASIC21.04■□□□□ 0.96
RNF20Q5VTR2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms