Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AL022326.1-202ENST00000641533 845 ntBASIC20.24■□□□□ 0.83
USH1GQ495M9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
USH1GQ495M9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
USH1GQ495M9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.24■□□□□ 0.83
USH1GQ495M9 HLA-J-201ENST00000462773 1622 ntBASIC20.24■□□□□ 0.83
USH1GQ495M9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
USH1GQ495M9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USH1GQ495M9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
USH1GQ495M9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USH1GQ495M9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USH1GQ495M9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USH1GQ495M9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USH1GQ495M9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USH1GQ495M9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
USH1GQ495M9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
USH1GQ495M9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
USH1GQ495M9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.23■□□□□ 0.83
USH1GQ495M9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.23■□□□□ 0.83
USH1GQ495M9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.23■□□□□ 0.83
USH1GQ495M9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.23■□□□□ 0.83
USH1GQ495M9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.23■□□□□ 0.83
USH1GQ495M9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USH1GQ495M9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USH1GQ495M9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USH1GQ495M9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USH1GQ495M9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
USH1GQ495M9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USH1GQ495M9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
USH1GQ495M9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USH1GQ495M9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
USH1GQ495M9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.23■□□□□ 0.83
USH1GQ495M9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.22■□□□□ 0.83
USH1GQ495M9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.22■□□□□ 0.83
USH1GQ495M9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.22■□□□□ 0.83
USH1GQ495M9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 SIGLEC16-201ENST00000599858 1437 ntBASIC20.22■□□□□ 0.83
USH1GQ495M9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.22■□□□□ 0.83
USH1GQ495M9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.22■□□□□ 0.83
USH1GQ495M9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.22■□□□□ 0.83
USH1GQ495M9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.22■□□□□ 0.83
USH1GQ495M9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.22■□□□□ 0.83
USH1GQ495M9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.22■□□□□ 0.83
USH1GQ495M9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.22■□□□□ 0.83
USH1GQ495M9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.22■□□□□ 0.83
USH1GQ495M9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.22■□□□□ 0.83
USH1GQ495M9 AC107918.4-202ENST00000641623 219 ntBASIC20.22■□□□□ 0.83
USH1GQ495M9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
USH1GQ495M9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USH1GQ495M9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.21■□□□□ 0.83
USH1GQ495M9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.21■□□□□ 0.83
USH1GQ495M9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
USH1GQ495M9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
USH1GQ495M9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.21■□□□□ 0.83
USH1GQ495M9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.21■□□□□ 0.83
USH1GQ495M9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.21■□□□□ 0.83
USH1GQ495M9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.21■□□□□ 0.83
USH1GQ495M9 AL020989.1-201ENST00000422979 469 ntBASIC20.21■□□□□ 0.83
USH1GQ495M9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.21■□□□□ 0.83
USH1GQ495M9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
USH1GQ495M9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.21■□□□□ 0.83
USH1GQ495M9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.21■□□□□ 0.83
USH1GQ495M9 AL671883.3-201ENST00000603274 991 ntBASIC20.21■□□□□ 0.83
USH1GQ495M9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 AC008735.5-201ENST00000623544 497 ntBASIC20.21■□□□□ 0.83
USH1GQ495M9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 AP002414.3-201ENST00000589352 1468 ntBASIC20.21■□□□□ 0.83
USH1GQ495M9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.21■□□□□ 0.83
USH1GQ495M9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.21■□□□□ 0.83
USH1GQ495M9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
USH1GQ495M9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms