Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
EFNB3Q15768 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.04■□□□□ -0
EFNB3Q15768 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
EFNB3Q15768 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.04■□□□□ -0
EFNB3Q15768 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
EFNB3Q15768 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.03■□□□□ -0
EFNB3Q15768 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
EFNB3Q15768 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.03■□□□□ -0
EFNB3Q15768 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.03■□□□□ -0
EFNB3Q15768 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 LAGE3P1-201ENST00000425356 484 ntBASIC15.03■□□□□ -0
EFNB3Q15768 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 RPS2P1-201ENST00000434010 821 ntBASIC15.03■□□□□ -0
EFNB3Q15768 AP000347.1-202ENST00000435868 847 ntBASIC15.03■□□□□ -0
EFNB3Q15768 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.03■□□□□ -0
EFNB3Q15768 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.03■□□□□ -0
EFNB3Q15768 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.03■□□□□ -0
EFNB3Q15768 OR7E14P-202ENST00000530490 1290 ntBASIC15.03■□□□□ -0
EFNB3Q15768 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.03■□□□□ -0
EFNB3Q15768 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
EFNB3Q15768 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
EFNB3Q15768 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.03■□□□□ -0
EFNB3Q15768 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 AC107918.4-202ENST00000641623 219 ntBASIC15.03■□□□□ -0
EFNB3Q15768 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
EFNB3Q15768 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.03■□□□□ -0
EFNB3Q15768 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 AC009949.1-201ENST00000623048 1830 ntBASIC15.03■□□□□ -0
EFNB3Q15768 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
EFNB3Q15768 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 LTB4R2-202ENST00000528054 3092 ntBASIC15.03■□□□□ -0
EFNB3Q15768 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.03■□□□□ -0
EFNB3Q15768 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
EFNB3Q15768 HLA-J-201ENST00000462773 1622 ntBASIC15.03■□□□□ -0
EFNB3Q15768 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.03■□□□□ -0
EFNB3Q15768 AP000997.3-201ENST00000623333 2250 ntBASIC15.03■□□□□ -0
EFNB3Q15768 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
EFNB3Q15768 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
EFNB3Q15768 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.02■□□□□ -0
EFNB3Q15768 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.02■□□□□ -0
EFNB3Q15768 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
EFNB3Q15768 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
EFNB3Q15768 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
EFNB3Q15768 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.02■□□□□ -0
EFNB3Q15768 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.02■□□□□ -0
EFNB3Q15768 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
EFNB3Q15768 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
EFNB3Q15768 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.02■□□□□ -0
EFNB3Q15768 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
EFNB3Q15768 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.02■□□□□ -0
EFNB3Q15768 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.02■□□□□ -0
EFNB3Q15768 AC243591.1-201ENST00000452967 1364 ntBASIC15.02■□□□□ -0
EFNB3Q15768 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.02■□□□□ -0
EFNB3Q15768 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.02■□□□□ -0
EFNB3Q15768 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
EFNB3Q15768 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
EFNB3Q15768 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.02■□□□□ -0
EFNB3Q15768 AC003669.1-201ENST00000334569 611 ntBASIC15.02■□□□□ -0
EFNB3Q15768 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.02■□□□□ -0
EFNB3Q15768 AL020989.1-201ENST00000422979 469 ntBASIC15.02■□□□□ -0
EFNB3Q15768 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.02■□□□□ -0
EFNB3Q15768 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.02■□□□□ -0
EFNB3Q15768 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.02■□□□□ -0
EFNB3Q15768 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.02■□□□□ -0
EFNB3Q15768 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.02■□□□□ -0
EFNB3Q15768 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
EFNB3Q15768 AC019129.2-201ENST00000609837 1235 ntBASIC15.02■□□□□ -0
EFNB3Q15768 SIRPAP1-201ENST00000448467 1770 ntBASIC15.02□□□□□ -0.01
EFNB3Q15768 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms