Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDR2Q01850 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDR2Q01850 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDR2Q01850 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
CDR2Q01850 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDR2Q01850 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDR2Q01850 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDR2Q01850 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.81■□□□□ 0.6
CDR2Q01850 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.81■□□□□ 0.6
CDR2Q01850 FAM86EP-206ENST00000510506 987 ntBASIC18.81■□□□□ 0.6
CDR2Q01850 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.81■□□□□ 0.6
CDR2Q01850 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDR2Q01850 IGHV3-41-201ENST00000613121 348 ntBASIC18.81■□□□□ 0.6
CDR2Q01850 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDR2Q01850 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.81■□□□□ 0.6
CDR2Q01850 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDR2Q01850 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDR2Q01850 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.81■□□□□ 0.6
CDR2Q01850 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.81■□□□□ 0.6
CDR2Q01850 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.81■□□□□ 0.6
CDR2Q01850 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.81■□□□□ 0.6
CDR2Q01850 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDR2Q01850 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDR2Q01850 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.81■□□□□ 0.6
CDR2Q01850 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDR2Q01850 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.8■□□□□ 0.6
CDR2Q01850 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.8■□□□□ 0.6
CDR2Q01850 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CDR2Q01850 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.8■□□□□ 0.6
CDR2Q01850 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.8■□□□□ 0.6
CDR2Q01850 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.8■□□□□ 0.6
CDR2Q01850 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.8■□□□□ 0.6
CDR2Q01850 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDR2Q01850 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDR2Q01850 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 AC125634.1-201ENST00000438758 1403 ntBASIC18.8■□□□□ 0.6
CDR2Q01850 LYSMD4-203ENST00000378904 2122 ntBASIC18.8■□□□□ 0.6
CDR2Q01850 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDR2Q01850 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDR2Q01850 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDR2Q01850 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDR2Q01850 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDR2Q01850 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.79■□□□□ 0.6
CDR2Q01850 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDR2Q01850 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.79■□□□□ 0.6
CDR2Q01850 AC007967.3-201ENST00000434308 558 ntBASIC18.79■□□□□ 0.6
CDR2Q01850 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDR2Q01850 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.79■□□□□ 0.6
CDR2Q01850 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.79■□□□□ 0.6
CDR2Q01850 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.79■□□□□ 0.6
CDR2Q01850 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDR2Q01850 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDR2Q01850 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDR2Q01850 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.79■□□□□ 0.6
CDR2Q01850 AC012313.1-201ENST00000593393 3059 ntBASIC18.79■□□□□ 0.6
CDR2Q01850 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDR2Q01850 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDR2Q01850 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDR2Q01850 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDR2Q01850 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.79■□□□□ 0.6
CDR2Q01850 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
CDR2Q01850 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDR2Q01850 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.78■□□□□ 0.6
CDR2Q01850 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDR2Q01850 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CDR2Q01850 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDR2Q01850 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CDR2Q01850 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDR2Q01850 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDR2Q01850 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CDR2Q01850 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.78■□□□□ 0.6
CDR2Q01850 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.78■□□□□ 0.6
CDR2Q01850 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDR2Q01850 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDR2Q01850 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.78■□□□□ 0.6
CDR2Q01850 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDR2Q01850 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDR2Q01850 AC002558.1-201ENST00000488906 803 ntBASIC18.78■□□□□ 0.6
CDR2Q01850 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.78■□□□□ 0.6
CDR2Q01850 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.78■□□□□ 0.6
CDR2Q01850 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDR2Q01850 AC011840.4-201ENST00000578471 627 ntBASIC18.78■□□□□ 0.6
CDR2Q01850 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
CDR2Q01850 AC005336.2-201ENST00000593183 939 ntBASIC18.78■□□□□ 0.6
CDR2Q01850 AL138831.2-201ENST00000606564 490 ntBASIC18.78■□□□□ 0.6
CDR2Q01850 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDR2Q01850 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms