Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.1■□□□□ 0.17
CXCR4P61073 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.1■□□□□ 0.17
CXCR4P61073 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCR4P61073 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CXCR4P61073 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.1■□□□□ 0.17
CXCR4P61073 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CXCR4P61073 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CXCR4P61073 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CXCR4P61073 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.09■□□□□ 0.17
CXCR4P61073 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.09■□□□□ 0.17
CXCR4P61073 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.09■□□□□ 0.17
CXCR4P61073 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CXCR4P61073 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.09■□□□□ 0.17
CXCR4P61073 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CXCR4P61073 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.09■□□□□ 0.17
CXCR4P61073 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.09■□□□□ 0.17
CXCR4P61073 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
CXCR4P61073 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.09■□□□□ 0.17
CXCR4P61073 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.09■□□□□ 0.17
CXCR4P61073 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.09■□□□□ 0.17
CXCR4P61073 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CXCR4P61073 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.09■□□□□ 0.17
CXCR4P61073 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.09■□□□□ 0.17
CXCR4P61073 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CXCR4P61073 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.09■□□□□ 0.17
CXCR4P61073 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CXCR4P61073 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CXCR4P61073 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CXCR4P61073 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
CXCR4P61073 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.08■□□□□ 0.17
CXCR4P61073 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.08■□□□□ 0.17
CXCR4P61073 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CXCR4P61073 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CXCR4P61073 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR4P61073 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR4P61073 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.08■□□□□ 0.16
CXCR4P61073 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.08■□□□□ 0.16
CXCR4P61073 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR4P61073 ABHD17AP1-201ENST00000358206 933 ntBASIC16.08■□□□□ 0.16
CXCR4P61073 RPS2P55-201ENST00000397318 883 ntBASIC16.08■□□□□ 0.16
CXCR4P61073 AL355355.2-201ENST00000442321 338 ntBASIC16.08■□□□□ 0.16
CXCR4P61073 AC107956.1-201ENST00000494359 873 ntBASIC16.08■□□□□ 0.16
CXCR4P61073 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR4P61073 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR4P61073 AP003041.3-201ENST00000527151 707 ntBASIC16.08■□□□□ 0.16
CXCR4P61073 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
CXCR4P61073 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR4P61073 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.08■□□□□ 0.16
CXCR4P61073 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CXCR4P61073 AP001412.1-201ENST00000608405 714 ntBASIC16.08■□□□□ 0.16
CXCR4P61073 AC113410.3-201ENST00000623366 203 ntBASIC16.08■□□□□ 0.16
CXCR4P61073 MST1L-201ENST00000442552 2185 ntBASIC16.08■□□□□ 0.16
CXCR4P61073 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR4P61073 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR4P61073 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CXCR4P61073 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.08■□□□□ 0.16
CXCR4P61073 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.08■□□□□ 0.16
CXCR4P61073 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR4P61073 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR4P61073 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR4P61073 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CXCR4P61073 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.07■□□□□ 0.16
CXCR4P61073 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR4P61073 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.07■□□□□ 0.16
CXCR4P61073 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR4P61073 LINC02199-201ENST00000506655 2702 ntBASIC16.07■□□□□ 0.16
CXCR4P61073 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.07■□□□□ 0.16
CXCR4P61073 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.07■□□□□ 0.16
CXCR4P61073 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.07■□□□□ 0.16
CXCR4P61073 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.07■□□□□ 0.16
CXCR4P61073 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CXCR4P61073 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms