Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.84■□□□□ 0.61
MCCD1P59942 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MCCD1P59942 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
MCCD1P59942 AC093525.9-201ENST00000624961 1746 ntBASIC18.83■□□□□ 0.61
MCCD1P59942 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
MCCD1P59942 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
MCCD1P59942 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
MCCD1P59942 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.83■□□□□ 0.61
MCCD1P59942 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MCCD1P59942 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MCCD1P59942 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MCCD1P59942 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MCCD1P59942 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MCCD1P59942 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
MCCD1P59942 KLF4P1-201ENST00000412782 1185 ntBASIC18.83■□□□□ 0.6
MCCD1P59942 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
MCCD1P59942 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.83■□□□□ 0.6
MCCD1P59942 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.83■□□□□ 0.6
MCCD1P59942 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.83■□□□□ 0.6
MCCD1P59942 REXO1L6P-202ENST00000619970 1078 ntBASIC18.83■□□□□ 0.6
MCCD1P59942 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MCCD1P59942 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.83■□□□□ 0.6
MCCD1P59942 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
MCCD1P59942 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MCCD1P59942 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MCCD1P59942 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
MCCD1P59942 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.83■□□□□ 0.6
MCCD1P59942 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MCCD1P59942 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MCCD1P59942 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MCCD1P59942 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MCCD1P59942 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
MCCD1P59942 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MCCD1P59942 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.83■□□□□ 0.6
MCCD1P59942 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MCCD1P59942 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.82■□□□□ 0.6
MCCD1P59942 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
MCCD1P59942 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 NUS1P2-201ENST00000417358 873 ntBASIC18.82■□□□□ 0.6
MCCD1P59942 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.82■□□□□ 0.6
MCCD1P59942 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.82■□□□□ 0.6
MCCD1P59942 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.82■□□□□ 0.6
MCCD1P59942 AL355877.3-201ENST00000622820 899 ntBASIC18.82■□□□□ 0.6
MCCD1P59942 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
MCCD1P59942 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.82■□□□□ 0.6
MCCD1P59942 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MCCD1P59942 AC004817.3-201ENST00000602957 2129 ntBASIC18.82■□□□□ 0.6
MCCD1P59942 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MCCD1P59942 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.81■□□□□ 0.6
MCCD1P59942 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MCCD1P59942 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
MCCD1P59942 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MCCD1P59942 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MCCD1P59942 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MCCD1P59942 SIGLEC30P-201ENST00000455569 941 ntBASIC18.81■□□□□ 0.6
MCCD1P59942 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MCCD1P59942 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.81■□□□□ 0.6
MCCD1P59942 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.81■□□□□ 0.6
MCCD1P59942 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.81■□□□□ 0.6
MCCD1P59942 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MCCD1P59942 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.81■□□□□ 0.6
MCCD1P59942 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.81■□□□□ 0.6
MCCD1P59942 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
MCCD1P59942 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MCCD1P59942 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.81■□□□□ 0.6
MCCD1P59942 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MCCD1P59942 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MCCD1P59942 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MCCD1P59942 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.81■□□□□ 0.6
MCCD1P59942 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MCCD1P59942 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MCCD1P59942 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.81■□□□□ 0.6
MCCD1P59942 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MCCD1P59942 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.81■□□□□ 0.6
MCCD1P59942 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.81■□□□□ 0.6
MCCD1P59942 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.81■□□□□ 0.6
MCCD1P59942 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
MCCD1P59942 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.8■□□□□ 0.6
MCCD1P59942 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MCCD1P59942 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MCCD1P59942 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.8■□□□□ 0.6
MCCD1P59942 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms