Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH4P55283 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH4P55283 NOC2LP2-201ENST00000407594 1944 ntBASIC18.02■□□□□ 0.47
CDH4P55283 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.02■□□□□ 0.47
CDH4P55283 HLA-J-201ENST00000462773 1622 ntBASIC18.01■□□□□ 0.47
CDH4P55283 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH4P55283 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH4P55283 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH4P55283 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDH4P55283 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH4P55283 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CDH4P55283 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH4P55283 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH4P55283 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH4P55283 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH4P55283 STK19B-204ENST00000512515 211 ntBASIC18.01■□□□□ 0.47
CDH4P55283 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 SART3-203ENST00000546611 1184 ntBASIC18.01■□□□□ 0.47
CDH4P55283 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH4P55283 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.01■□□□□ 0.47
CDH4P55283 NKAPP1-205ENST00000585790 367 ntBASIC18.01■□□□□ 0.47
CDH4P55283 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.01■□□□□ 0.47
CDH4P55283 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDH4P55283 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CDH4P55283 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH4P55283 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH4P55283 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH4P55283 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18■□□□□ 0.47
CDH4P55283 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH4P55283 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18■□□□□ 0.47
CDH4P55283 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH4P55283 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
CDH4P55283 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDH4P55283 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18■□□□□ 0.47
CDH4P55283 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH4P55283 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18■□□□□ 0.47
CDH4P55283 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH4P55283 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDH4P55283 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18■□□□□ 0.47
CDH4P55283 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH4P55283 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18■□□□□ 0.47
CDH4P55283 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18■□□□□ 0.47
CDH4P55283 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH4P55283 AC064862.7-201ENST00000604520 867 ntBASIC18■□□□□ 0.47
CDH4P55283 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18■□□□□ 0.47
CDH4P55283 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH4P55283 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH4P55283 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH4P55283 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH4P55283 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18■□□□□ 0.47
CDH4P55283 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18■□□□□ 0.47
CDH4P55283 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH4P55283 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH4P55283 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDH4P55283 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH4P55283 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH4P55283 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH4P55283 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH4P55283 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.99■□□□□ 0.47
CDH4P55283 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH4P55283 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDH4P55283 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH4P55283 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH4P55283 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH4P55283 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH4P55283 AL355312.1-201ENST00000407115 2176 ntBASIC17.99■□□□□ 0.47
CDH4P55283 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH4P55283 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH4P55283 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH4P55283 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH4P55283 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH4P55283 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH4P55283 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CDH4P55283 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH4P55283 AC073648.2-201ENST00000510116 352 ntBASIC17.99■□□□□ 0.47
CDH4P55283 AL662844.1-201ENST00000546340 181 ntBASIC17.99■□□□□ 0.47
CDH4P55283 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH4P55283 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.99■□□□□ 0.47
CDH4P55283 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH4P55283 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH4P55283 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CDH4P55283 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH4P55283 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms