Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN2P51788 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLCN2P51788 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 AL163051.1-201ENST00000569214 1512 ntBASIC17.12■□□□□ 0.33
CLCN2P51788 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLCN2P51788 AL138688.1-201ENST00000624851 1594 ntBASIC17.12■□□□□ 0.33
CLCN2P51788 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
CLCN2P51788 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
CLCN2P51788 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
CLCN2P51788 HLA-F-220ENST00000434407 884 ntBASIC17.12■□□□□ 0.33
CLCN2P51788 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.12■□□□□ 0.33
CLCN2P51788 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.12■□□□□ 0.33
CLCN2P51788 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN2P51788 PCDHB19P-201ENST00000570871 2371 ntBASIC17.12■□□□□ 0.33
CLCN2P51788 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN2P51788 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLCN2P51788 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN2P51788 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.12■□□□□ 0.33
CLCN2P51788 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN2P51788 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 AL096828.2-201ENST00000567259 1965 ntBASIC17.11■□□□□ 0.33
CLCN2P51788 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN2P51788 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN2P51788 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.11■□□□□ 0.33
CLCN2P51788 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN2P51788 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN2P51788 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN2P51788 AC116407.4-201ENST00000623319 1061 ntBASIC17.11■□□□□ 0.33
CLCN2P51788 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.11■□□□□ 0.33
CLCN2P51788 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLCN2P51788 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN2P51788 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN2P51788 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLCN2P51788 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN2P51788 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN2P51788 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CLCN2P51788 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLCN2P51788 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLCN2P51788 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN2P51788 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.1■□□□□ 0.33
CLCN2P51788 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLCN2P51788 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN2P51788 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLCN2P51788 AL645929.1-201ENST00000420084 975 ntBASIC17.1■□□□□ 0.33
CLCN2P51788 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLCN2P51788 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN2P51788 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLCN2P51788 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.1■□□□□ 0.33
CLCN2P51788 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN2P51788 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms