Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDC34P49427 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.98□□□□□ -0.17
CDC34P49427 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDC34P49427 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.98□□□□□ -0.17
CDC34P49427 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC34P49427 KRT16P1-201ENST00000399124 1418 ntBASIC13.98□□□□□ -0.17
CDC34P49427 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC34P49427 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.98□□□□□ -0.17
CDC34P49427 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDC34P49427 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.98□□□□□ -0.17
CDC34P49427 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
CDC34P49427 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CDC34P49427 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CDC34P49427 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC34P49427 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CDC34P49427 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC34P49427 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC34P49427 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC34P49427 AC060834.1-201ENST00000443027 2032 ntBASIC13.97□□□□□ -0.17
CDC34P49427 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 FLJ38576-201ENST00000623820 2459 ntBASIC13.97□□□□□ -0.17
CDC34P49427 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CDC34P49427 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 AC008040.2-201ENST00000461049 708 ntBASIC13.97□□□□□ -0.17
CDC34P49427 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CDC34P49427 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.97□□□□□ -0.17
CDC34P49427 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC34P49427 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 MIR5787-201ENST00000611784 55 ntBASIC13.97□□□□□ -0.17
CDC34P49427 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CDC34P49427 AC116407.2-201ENST00000613639 860 ntBASIC13.97□□□□□ -0.17
CDC34P49427 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
CDC34P49427 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.97□□□□□ -0.17
CDC34P49427 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC34P49427 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC34P49427 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC34P49427 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 HOXB1-202ENST00000577092 1414 ntBASIC13.97□□□□□ -0.17
CDC34P49427 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CDC34P49427 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.97□□□□□ -0.17
CDC34P49427 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC34P49427 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.97□□□□□ -0.17
CDC34P49427 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CDC34P49427 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CDC34P49427 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CDC34P49427 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.96□□□□□ -0.17
CDC34P49427 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CDC34P49427 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.96□□□□□ -0.17
CDC34P49427 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC34P49427 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CDC34P49427 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CDC34P49427 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC34P49427 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CDC34P49427 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CDC34P49427 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CDC34P49427 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
CDC34P49427 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CDC34P49427 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CDC34P49427 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.96□□□□□ -0.17
CDC34P49427 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CDC34P49427 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDC34P49427 KRT18P23-201ENST00000435622 1283 ntBASIC13.96□□□□□ -0.17
CDC34P49427 NCF1B-203ENST00000435988 1254 ntBASIC13.96□□□□□ -0.17
CDC34P49427 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.96□□□□□ -0.17
CDC34P49427 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.96□□□□□ -0.17
CDC34P49427 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.96□□□□□ -0.17
CDC34P49427 AL137784.2-201ENST00000607332 1000 ntBASIC13.96□□□□□ -0.17
CDC34P49427 AC130371.2-201ENST00000619443 611 ntBASIC13.96□□□□□ -0.17
CDC34P49427 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms