Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC6A12P48065 ARMC10P1-201ENST00000313754 855 ntBASIC17.01■□□□□ 0.31
SLC6A12P48065 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC6A12P48065 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SLC6A12P48065 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC6A12P48065 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC6A12P48065 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC6A12P48065 IGHV3-52-201ENST00000519770 353 ntBASIC17.01■□□□□ 0.31
SLC6A12P48065 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.01■□□□□ 0.31
SLC6A12P48065 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC6A12P48065 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC6A12P48065 BNIP3P18-201ENST00000593976 575 ntBASIC17.01■□□□□ 0.31
SLC6A12P48065 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.01■□□□□ 0.31
SLC6A12P48065 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SLC6A12P48065 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC6A12P48065 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC6A12P48065 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC6A12P48065 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC6A12P48065 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC6A12P48065 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC6A12P48065 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC6A12P48065 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SLC6A12P48065 NSUN5P1-202ENST00000421140 1535 ntBASIC17.01■□□□□ 0.31
SLC6A12P48065 NSUN5P2-203ENST00000457352 1529 ntBASIC17.01■□□□□ 0.31
SLC6A12P48065 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SLC6A12P48065 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.01■□□□□ 0.31
SLC6A12P48065 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17■□□□□ 0.31
SLC6A12P48065 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17■□□□□ 0.31
SLC6A12P48065 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SLC6A12P48065 AL353593.2-201ENST00000602529 1483 ntBASIC17■□□□□ 0.31
SLC6A12P48065 TP73-AS1-210ENST00000637775 1455 ntBASIC17■□□□□ 0.31
SLC6A12P48065 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17■□□□□ 0.31
SLC6A12P48065 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 ATP5G2P1-201ENST00000433580 426 ntBASIC17■□□□□ 0.31
SLC6A12P48065 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17■□□□□ 0.31
SLC6A12P48065 LINC00265-3P-201ENST00000447588 903 ntBASIC17■□□□□ 0.31
SLC6A12P48065 KRT8P10-201ENST00000450021 1447 ntBASIC17■□□□□ 0.31
SLC6A12P48065 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17■□□□□ 0.31
SLC6A12P48065 AP001094.4-201ENST00000579008 2176 ntBASIC17■□□□□ 0.31
SLC6A12P48065 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SLC6A12P48065 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SLC6A12P48065 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17■□□□□ 0.31
SLC6A12P48065 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17■□□□□ 0.31
SLC6A12P48065 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A12P48065 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SLC6A12P48065 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SLC6A12P48065 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A12P48065 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC6A12P48065 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SLC6A12P48065 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A12P48065 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A12P48065 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A12P48065 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC6A12P48065 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC6A12P48065 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC6A12P48065 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A12P48065 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC6A12P48065 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC6A12P48065 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A12P48065 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC6A12P48065 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC6A12P48065 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC6A12P48065 STK25P1-201ENST00000585406 838 ntBASIC16.99■□□□□ 0.31
SLC6A12P48065 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC6A12P48065 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.99■□□□□ 0.31
SLC6A12P48065 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SLC6A12P48065 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC6A12P48065 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A12P48065 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC6A12P48065 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC6A12P48065 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC6A12P48065 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC6A12P48065 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC6A12P48065 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A12P48065 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SLC6A12P48065 FZD10-202ENST00000539839 3282 ntBASIC16.99■□□□□ 0.31
SLC6A12P48065 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
SLC6A12P48065 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SLC6A12P48065 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC6A12P48065 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC6A12P48065 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A12P48065 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms