Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.57□□□□□ -0.08
SNCAP37840 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SNCAP37840 AL355355.2-201ENST00000442321 338 ntBASIC14.57□□□□□ -0.08
SNCAP37840 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.57□□□□□ -0.08
SNCAP37840 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.57□□□□□ -0.08
SNCAP37840 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SNCAP37840 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
SNCAP37840 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SNCAP37840 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.57□□□□□ -0.08
SNCAP37840 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 AGGF1P2-201ENST00000426656 2106 ntBASIC14.57□□□□□ -0.08
SNCAP37840 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SNCAP37840 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.57□□□□□ -0.08
SNCAP37840 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SNCAP37840 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SNCAP37840 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.57□□□□□ -0.08
SNCAP37840 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SNCAP37840 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 AL163051.1-201ENST00000569214 1512 ntBASIC14.56□□□□□ -0.08
SNCAP37840 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SNCAP37840 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 AC106886.4-201ENST00000623557 2502 ntBASIC14.56□□□□□ -0.08
SNCAP37840 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.56□□□□□ -0.08
SNCAP37840 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 PHGDH-209ENST00000641074 1780 ntBASIC14.56□□□□□ -0.08
SNCAP37840 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.56□□□□□ -0.08
SNCAP37840 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SNCAP37840 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.56□□□□□ -0.08
SNCAP37840 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.56□□□□□ -0.08
SNCAP37840 MIR149-201ENST00000384879 89 ntBASIC14.56□□□□□ -0.08
SNCAP37840 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.56□□□□□ -0.08
SNCAP37840 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.56□□□□□ -0.08
SNCAP37840 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.56□□□□□ -0.08
SNCAP37840 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.56□□□□□ -0.08
SNCAP37840 AC142381.4-202ENST00000563973 229 ntBASIC14.56□□□□□ -0.08
SNCAP37840 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SNCAP37840 ITM2C-210ENST00000620962 501 ntBASIC14.56□□□□□ -0.08
SNCAP37840 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
SNCAP37840 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SNCAP37840 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SNCAP37840 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SNCAP37840 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SNCAP37840 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.56□□□□□ -0.08
SNCAP37840 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SNCAP37840 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SNCAP37840 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SNCAP37840 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
SNCAP37840 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.55□□□□□ -0.08
SNCAP37840 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
SNCAP37840 AC099343.3-201ENST00000605834 2503 ntBASIC14.55□□□□□ -0.08
SNCAP37840 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
SNCAP37840 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.55□□□□□ -0.08
SNCAP37840 CROCCP2-202ENST00000412962 2773 ntBASIC14.55□□□□□ -0.08
SNCAP37840 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.55□□□□□ -0.08
SNCAP37840 UBE2SP1-201ENST00000450587 669 ntBASIC14.55□□□□□ -0.08
SNCAP37840 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.55□□□□□ -0.08
SNCAP37840 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.55□□□□□ -0.08
SNCAP37840 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SNCAP37840 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SNCAP37840 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms