Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P31025 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P31025 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P31025 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P31025 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
LCN1P31025 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P31025 COX5BP2-201ENST00000392354 334 ntBASIC16.35■□□□□ 0.21
LCN1P31025 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LCN1P31025 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.35■□□□□ 0.21
LCN1P31025 AC005104.2-201ENST00000427818 678 ntBASIC16.35■□□□□ 0.21
LCN1P31025 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P31025 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P31025 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.35■□□□□ 0.21
LCN1P31025 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P31025 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.35■□□□□ 0.21
LCN1P31025 AL138831.2-201ENST00000606564 490 ntBASIC16.35■□□□□ 0.21
LCN1P31025 AC069148.1-201ENST00000608741 768 ntBASIC16.35■□□□□ 0.21
LCN1P31025 AL358472.4-201ENST00000633140 710 ntBASIC16.35■□□□□ 0.21
LCN1P31025 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P31025 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.35■□□□□ 0.21
LCN1P31025 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P31025 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P31025 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P31025 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.35■□□□□ 0.21
LCN1P31025 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.35■□□□□ 0.21
LCN1P31025 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LCN1P31025 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCN1P31025 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.35■□□□□ 0.21
LCN1P31025 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.35■□□□□ 0.21
LCN1P31025 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
LCN1P31025 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.35■□□□□ 0.21
LCN1P31025 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.34■□□□□ 0.21
LCN1P31025 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LCN1P31025 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.34■□□□□ 0.21
LCN1P31025 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.34■□□□□ 0.21
LCN1P31025 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LCN1P31025 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 AL845331.1-201ENST00000424978 1190 ntBASIC16.34■□□□□ 0.21
LCN1P31025 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.34■□□□□ 0.21
LCN1P31025 AC122714.2-201ENST00000502787 707 ntBASIC16.34■□□□□ 0.21
LCN1P31025 AC009533.2-201ENST00000543664 586 ntBASIC16.34■□□□□ 0.21
LCN1P31025 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.34■□□□□ 0.21
LCN1P31025 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 Z69720.1-201ENST00000601483 472 ntBASIC16.34■□□□□ 0.21
LCN1P31025 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.34■□□□□ 0.21
LCN1P31025 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.34■□□□□ 0.21
LCN1P31025 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LCN1P31025 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 KRT18P1-202ENST00000452408 1331 ntBASIC16.34■□□□□ 0.21
LCN1P31025 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LCN1P31025 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.34■□□□□ 0.21
LCN1P31025 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCN1P31025 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.34■□□□□ 0.21
LCN1P31025 AC133963.1-201ENST00000504166 1679 ntBASIC16.34■□□□□ 0.21
LCN1P31025 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LCN1P31025 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LCN1P31025 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LCN1P31025 AC134043.2-201ENST00000624206 2238 ntBASIC16.33■□□□□ 0.2
LCN1P31025 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.33■□□□□ 0.2
LCN1P31025 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.33■□□□□ 0.2
LCN1P31025 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.33■□□□□ 0.2
LCN1P31025 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.33■□□□□ 0.2
LCN1P31025 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.33■□□□□ 0.2
LCN1P31025 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LCN1P31025 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.33■□□□□ 0.2
LCN1P31025 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.33■□□□□ 0.2
LCN1P31025 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
LCN1P31025 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LCN1P31025 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LCN1P31025 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
LCN1P31025 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.33■□□□□ 0.2
LCN1P31025 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.33■□□□□ 0.2
LCN1P31025 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.33■□□□□ 0.2
LCN1P31025 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LCN1P31025 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms