Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.17■□□□□ 0.02
CCL1P22362 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CCL1P22362 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.17■□□□□ 0.02
CCL1P22362 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.17■□□□□ 0.02
CCL1P22362 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CCL1P22362 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.17■□□□□ 0.02
CCL1P22362 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.17■□□□□ 0.02
CCL1P22362 AC007967.3-201ENST00000434308 558 ntBASIC15.17■□□□□ 0.02
CCL1P22362 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 RN7SL606P-201ENST00000472779 293 ntBASIC15.17■□□□□ 0.02
CCL1P22362 GUSBP12-201ENST00000513727 720 ntBASIC15.17■□□□□ 0.02
CCL1P22362 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.17■□□□□ 0.02
CCL1P22362 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.17■□□□□ 0.02
CCL1P22362 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.17■□□□□ 0.02
CCL1P22362 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.17■□□□□ 0.02
CCL1P22362 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.17■□□□□ 0.02
CCL1P22362 LINC02012-201ENST00000608206 1725 ntBASIC15.17■□□□□ 0.02
CCL1P22362 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CCL1P22362 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.17■□□□□ 0.02
CCL1P22362 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CCL1P22362 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.16■□□□□ 0.02
CCL1P22362 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.16■□□□□ 0.02
CCL1P22362 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCL1P22362 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 AC211429.1-201ENST00000415277 523 ntBASIC15.16■□□□□ 0.02
CCL1P22362 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
CCL1P22362 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.16■□□□□ 0.02
CCL1P22362 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.16■□□□□ 0.02
CCL1P22362 AC122714.2-201ENST00000502787 707 ntBASIC15.16■□□□□ 0.02
CCL1P22362 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.16■□□□□ 0.02
CCL1P22362 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.16■□□□□ 0.02
CCL1P22362 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.16■□□□□ 0.02
CCL1P22362 LINC01023-201ENST00000606054 436 ntBASIC15.16■□□□□ 0.02
CCL1P22362 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.16■□□□□ 0.02
CCL1P22362 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCL1P22362 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CCL1P22362 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 AC125634.1-201ENST00000438758 1403 ntBASIC15.16■□□□□ 0.02
CCL1P22362 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.16■□□□□ 0.02
CCL1P22362 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CCL1P22362 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCL1P22362 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCL1P22362 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL1P22362 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL1P22362 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL1P22362 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL1P22362 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCL1P22362 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCL1P22362 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL1P22362 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL1P22362 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL1P22362 AC011676.5-201ENST00000624864 2660 ntBASIC15.15■□□□□ 0.02
CCL1P22362 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL1P22362 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL1P22362 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL1P22362 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCL1P22362 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
CCL1P22362 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCL1P22362 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCL1P22362 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL1P22362 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL1P22362 AL645929.1-201ENST00000420084 975 ntBASIC15.15■□□□□ 0.02
CCL1P22362 AC104076.2-201ENST00000448912 469 ntBASIC15.15■□□□□ 0.02
CCL1P22362 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL1P22362 IGHV3-52-201ENST00000519770 353 ntBASIC15.15■□□□□ 0.02
CCL1P22362 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL1P22362 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL1P22362 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms