Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDH3P22223 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.31■□□□□ 0.36
CDH3P22223 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH3P22223 AL353801.3-201ENST00000609898 542 ntBASIC17.31■□□□□ 0.36
CDH3P22223 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDH3P22223 AL391005.1-201ENST00000623953 2435 ntBASIC17.31■□□□□ 0.36
CDH3P22223 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH3P22223 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CDH3P22223 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH3P22223 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.31■□□□□ 0.36
CDH3P22223 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH3P22223 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH3P22223 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH3P22223 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDH3P22223 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH3P22223 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH3P22223 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDH3P22223 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH3P22223 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH3P22223 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CDH3P22223 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CDH3P22223 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDH3P22223 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH3P22223 KRT18P31-201ENST00000506277 1292 ntBASIC17.3■□□□□ 0.36
CDH3P22223 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.3■□□□□ 0.36
CDH3P22223 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.3■□□□□ 0.36
CDH3P22223 IFNL4P1-201ENST00000607083 540 ntBASIC17.3■□□□□ 0.36
CDH3P22223 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.3■□□□□ 0.36
CDH3P22223 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH3P22223 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH3P22223 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH3P22223 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH3P22223 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CDH3P22223 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.3■□□□□ 0.36
CDH3P22223 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH3P22223 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDH3P22223 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH3P22223 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH3P22223 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH3P22223 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH3P22223 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDH3P22223 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH3P22223 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH3P22223 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDH3P22223 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH3P22223 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.29■□□□□ 0.36
CDH3P22223 AC096582.2-201ENST00000510860 516 ntBASIC17.29■□□□□ 0.36
CDH3P22223 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.29■□□□□ 0.36
CDH3P22223 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH3P22223 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.29■□□□□ 0.36
CDH3P22223 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH3P22223 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH3P22223 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH3P22223 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDH3P22223 AC132938.6-201ENST00000623828 1655 ntBASIC17.29■□□□□ 0.36
CDH3P22223 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDH3P22223 AC093010.1-201ENST00000473625 1624 ntBASIC17.29■□□□□ 0.36
CDH3P22223 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH3P22223 PKD1P1-201ENST00000458669 6805 ntBASIC17.28■□□□□ 0.36
CDH3P22223 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDH3P22223 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms