Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB4AP20338 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RAB4AP20338 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB4AP20338 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.56□□□□□ -0.24
RAB4AP20338 AC112777.1-201ENST00000540175 1423 ntBASIC13.56□□□□□ -0.24
RAB4AP20338 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.55□□□□□ -0.24
RAB4AP20338 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
RAB4AP20338 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
RAB4AP20338 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB4AP20338 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB4AP20338 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.55□□□□□ -0.24
RAB4AP20338 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
RAB4AP20338 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB4AP20338 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB4AP20338 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RAB4AP20338 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
RAB4AP20338 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB4AP20338 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.55□□□□□ -0.24
RAB4AP20338 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.55□□□□□ -0.24
RAB4AP20338 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RAB4AP20338 AC068587.9-201ENST00000641814 219 ntBASIC13.55□□□□□ -0.24
RAB4AP20338 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 AC026691.1-201ENST00000602502 2017 ntBASIC13.55□□□□□ -0.24
RAB4AP20338 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RAB4AP20338 AC132872.4-202ENST00000622924 2756 ntBASIC13.55□□□□□ -0.24
RAB4AP20338 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RAB4AP20338 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RAB4AP20338 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAB4AP20338 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RAB4AP20338 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAB4AP20338 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
RAB4AP20338 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
RAB4AP20338 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
RAB4AP20338 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB4AP20338 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
RAB4AP20338 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
RAB4AP20338 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB4AP20338 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RAB4AP20338 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB4AP20338 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
RAB4AP20338 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB4AP20338 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 AC016769.1-201ENST00000409132 1010 ntBASIC13.54□□□□□ -0.24
RAB4AP20338 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RAB4AP20338 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB4AP20338 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RAB4AP20338 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB4AP20338 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
RAB4AP20338 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RAB4AP20338 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAB4AP20338 LYSMD4-203ENST00000378904 2122 ntBASIC13.54□□□□□ -0.24
RAB4AP20338 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB4AP20338 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.54□□□□□ -0.24
RAB4AP20338 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB4AP20338 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB4AP20338 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RAB4AP20338 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB4AP20338 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB4AP20338 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms