Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AP005901.3-202ENST00000581653 237 ntBASIC17.83■□□□□ 0.44
HLA-DPA1P20036 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 NPAP1P7-201ENST00000613027 823 ntBASIC17.83■□□□□ 0.44
HLA-DPA1P20036 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 AC091607.1-201ENST00000490318 1060 ntBASIC17.82■□□□□ 0.44
HLA-DPA1P20036 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 MIR3180-1-201ENST00000580374 94 ntBASIC17.82■□□□□ 0.44
HLA-DPA1P20036 MIR3180-3-201ENST00000584616 94 ntBASIC17.82■□□□□ 0.44
HLA-DPA1P20036 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DPA1P20036 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 LINC00265-3P-201ENST00000447588 903 ntBASIC17.81■□□□□ 0.44
HLA-DPA1P20036 AC002558.1-201ENST00000488906 803 ntBASIC17.81■□□□□ 0.44
HLA-DPA1P20036 AC122714.2-201ENST00000502787 707 ntBASIC17.81■□□□□ 0.44
HLA-DPA1P20036 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 AL138688.1-201ENST00000624851 1594 ntBASIC17.81■□□□□ 0.44
HLA-DPA1P20036 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DPA1P20036 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 CROCCP1-201ENST00000426910 5675 ntBASIC17.8■□□□□ 0.44
HLA-DPA1P20036 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 FAM220CP-201ENST00000395253 831 ntBASIC17.8■□□□□ 0.44
HLA-DPA1P20036 KRT17P6-201ENST00000453795 1220 ntBASIC17.8■□□□□ 0.44
HLA-DPA1P20036 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.8■□□□□ 0.44
HLA-DPA1P20036 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms