Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
KRT4P19013 FLJ38576-201ENST00000623820 2459 ntBASIC17.72■□□□□ 0.43
KRT4P19013 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KRT4P19013 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.72■□□□□ 0.43
KRT4P19013 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT4P19013 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KRT4P19013 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.72■□□□□ 0.43
KRT4P19013 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 RBM17P1-201ENST00000453646 1190 ntBASIC17.72■□□□□ 0.43
KRT4P19013 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.72■□□□□ 0.43
KRT4P19013 FAM201B-201ENST00000458407 597 ntBASIC17.72■□□□□ 0.43
KRT4P19013 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.72■□□□□ 0.43
KRT4P19013 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.72■□□□□ 0.43
KRT4P19013 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
KRT4P19013 LYSMD4-203ENST00000378904 2122 ntBASIC17.72■□□□□ 0.43
KRT4P19013 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
KRT4P19013 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 PCDH8P1-201ENST00000428983 2773 ntBASIC17.72■□□□□ 0.43
KRT4P19013 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KRT4P19013 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
KRT4P19013 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KRT4P19013 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KRT4P19013 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KRT4P19013 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
KRT4P19013 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
KRT4P19013 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT4P19013 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT4P19013 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
KRT4P19013 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 KRT8P47-201ENST00000604727 1398 ntBASIC17.71■□□□□ 0.43
KRT4P19013 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT4P19013 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
KRT4P19013 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.71■□□□□ 0.43
KRT4P19013 AC142381.4-202ENST00000563973 229 ntBASIC17.71■□□□□ 0.43
KRT4P19013 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.71■□□□□ 0.43
KRT4P19013 MIR3917-201ENST00000580971 93 ntBASIC17.71■□□□□ 0.43
KRT4P19013 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
KRT4P19013 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
KRT4P19013 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT4P19013 AC010653.2-201ENST00000623505 997 ntBASIC17.71■□□□□ 0.43
KRT4P19013 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT4P19013 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
KRT4P19013 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.71■□□□□ 0.43
KRT4P19013 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.71■□□□□ 0.43
KRT4P19013 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
KRT4P19013 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KRT4P19013 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
KRT4P19013 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
KRT4P19013 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
KRT4P19013 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
KRT4P19013 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.42
KRT4P19013 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.71■□□□□ 0.42
KRT4P19013 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
KRT4P19013 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
KRT4P19013 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT4P19013 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.7■□□□□ 0.42
KRT4P19013 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT4P19013 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT4P19013 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
KRT4P19013 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT4P19013 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms