Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CGB3P0DN86 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
CGB3P0DN86 NSUN5P1-202ENST00000421140 1535 ntBASIC14.46□□□□□ -0.09
CGB3P0DN86 NSUN5P2-203ENST00000457352 1529 ntBASIC14.46□□□□□ -0.09
CGB3P0DN86 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.46□□□□□ -0.09
CGB3P0DN86 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CGB3P0DN86 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CGB3P0DN86 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.46□□□□□ -0.09
CGB3P0DN86 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CGB3P0DN86 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CGB3P0DN86 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CGB3P0DN86 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CGB3P0DN86 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CGB3P0DN86 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CGB3P0DN86 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.46□□□□□ -0.09
CGB3P0DN86 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.46□□□□□ -0.09
CGB3P0DN86 IGHV3-52-201ENST00000519770 353 ntBASIC14.46□□□□□ -0.09
CGB3P0DN86 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CGB3P0DN86 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.46□□□□□ -0.09
CGB3P0DN86 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.46□□□□□ -0.09
CGB3P0DN86 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.46□□□□□ -0.09
CGB3P0DN86 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.46□□□□□ -0.09
CGB3P0DN86 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.46□□□□□ -0.09
CGB3P0DN86 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
CGB3P0DN86 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.46□□□□□ -0.09
CGB3P0DN86 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CGB3P0DN86 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CGB3P0DN86 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CGB3P0DN86 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CGB3P0DN86 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.46□□□□□ -0.1
CGB3P0DN86 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CGB3P0DN86 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CGB3P0DN86 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CGB3P0DN86 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.45□□□□□ -0.1
CGB3P0DN86 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.45□□□□□ -0.1
CGB3P0DN86 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.45□□□□□ -0.1
CGB3P0DN86 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CGB3P0DN86 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CGB3P0DN86 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.45□□□□□ -0.1
CGB3P0DN86 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.45□□□□□ -0.1
CGB3P0DN86 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 POM121L3P-201ENST00000419331 1163 ntBASIC14.45□□□□□ -0.1
CGB3P0DN86 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.45□□□□□ -0.1
CGB3P0DN86 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CGB3P0DN86 LINC00265-3P-201ENST00000447588 903 ntBASIC14.45□□□□□ -0.1
CGB3P0DN86 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.45□□□□□ -0.1
CGB3P0DN86 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.45□□□□□ -0.1
CGB3P0DN86 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CGB3P0DN86 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
CGB3P0DN86 STK25P1-201ENST00000585406 838 ntBASIC14.45□□□□□ -0.1
CGB3P0DN86 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.45□□□□□ -0.1
CGB3P0DN86 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CGB3P0DN86 AC092329.2-201ENST00000598402 547 ntBASIC14.45□□□□□ -0.1
CGB3P0DN86 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.45□□□□□ -0.1
CGB3P0DN86 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.45□□□□□ -0.1
CGB3P0DN86 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CGB3P0DN86 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CGB3P0DN86 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.45□□□□□ -0.1
CGB3P0DN86 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.45□□□□□ -0.1
CGB3P0DN86 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 AC116353.5-201ENST00000638148 1699 ntBASIC14.45□□□□□ -0.1
CGB3P0DN86 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.45□□□□□ -0.1
CGB3P0DN86 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.45□□□□□ -0.1
CGB3P0DN86 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.45□□□□□ -0.1
CGB3P0DN86 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CGB3P0DN86 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CGB3P0DN86 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CGB3P0DN86 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.44□□□□□ -0.1
CGB3P0DN86 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.44□□□□□ -0.1
CGB3P0DN86 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CGB3P0DN86 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CGB3P0DN86 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms