Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.02■□□□□ 0.15
FREM3P0C091 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.02■□□□□ 0.15
FREM3P0C091 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
FREM3P0C091 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FREM3P0C091 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
FREM3P0C091 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.02■□□□□ 0.15
FREM3P0C091 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
FREM3P0C091 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
FREM3P0C091 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.01■□□□□ 0.15
FREM3P0C091 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.01■□□□□ 0.15
FREM3P0C091 IGHV3-22-201ENST00000520721 359 ntBASIC16.01■□□□□ 0.15
FREM3P0C091 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.01■□□□□ 0.15
FREM3P0C091 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.01■□□□□ 0.15
FREM3P0C091 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.01■□□□□ 0.15
FREM3P0C091 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.01■□□□□ 0.15
FREM3P0C091 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FREM3P0C091 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FREM3P0C091 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.01■□□□□ 0.15
FREM3P0C091 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.01■□□□□ 0.15
FREM3P0C091 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.01■□□□□ 0.15
FREM3P0C091 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FREM3P0C091 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FREM3P0C091 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16■□□□□ 0.15
FREM3P0C091 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16■□□□□ 0.15
FREM3P0C091 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16■□□□□ 0.15
FREM3P0C091 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16■□□□□ 0.15
FREM3P0C091 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FREM3P0C091 SLC25A6P5-201ENST00000435663 894 ntBASIC16■□□□□ 0.15
FREM3P0C091 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16■□□□□ 0.15
FREM3P0C091 AC106795.1-205ENST00000512851 1056 ntBASIC16■□□□□ 0.15
FREM3P0C091 AC012640.2-201ENST00000561606 901 ntBASIC16■□□□□ 0.15
FREM3P0C091 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16■□□□□ 0.15
FREM3P0C091 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16■□□□□ 0.15
FREM3P0C091 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16■□□□□ 0.15
FREM3P0C091 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16■□□□□ 0.15
FREM3P0C091 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FREM3P0C091 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 AC097374.2-201ENST00000618617 1306 ntBASIC16■□□□□ 0.15
FREM3P0C091 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16■□□□□ 0.15
FREM3P0C091 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
FREM3P0C091 SIGLEC16-201ENST00000599858 1437 ntBASIC16■□□□□ 0.15
FREM3P0C091 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FREM3P0C091 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16■□□□□ 0.15
FREM3P0C091 DDX43P3-201ENST00000441064 443 ntBASIC16■□□□□ 0.15
FREM3P0C091 SCARNA2-201ENST00000458748 420 ntBASIC16■□□□□ 0.15
FREM3P0C091 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
FREM3P0C091 AC021087.4-201ENST00000563761 564 ntBASIC16■□□□□ 0.15
FREM3P0C091 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16■□□□□ 0.15
FREM3P0C091 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16■□□□□ 0.15
FREM3P0C091 MIR5100-201ENST00000579544 119 ntBASIC16■□□□□ 0.15
FREM3P0C091 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16■□□□□ 0.15
FREM3P0C091 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16■□□□□ 0.15
FREM3P0C091 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16■□□□□ 0.15
FREM3P0C091 NME4-212ENST00000621774 904 ntTSL 3 BASIC16■□□□□ 0.15
FREM3P0C091 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
FREM3P0C091 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
FREM3P0C091 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FREM3P0C091 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16■□□□□ 0.15
FREM3P0C091 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
FREM3P0C091 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FREM3P0C091 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.99■□□□□ 0.15
FREM3P0C091 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FREM3P0C091 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FREM3P0C091 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.99■□□□□ 0.15
FREM3P0C091 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
FREM3P0C091 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
FREM3P0C091 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms