Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AP000867.4-201ENST00000641616 219 ntBASIC17.79■□□□□ 0.44
RETP07949 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.79■□□□□ 0.44
RETP07949 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.79■□□□□ 0.44
RETP07949 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RETP07949 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.79■□□□□ 0.44
RETP07949 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RETP07949 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RETP07949 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.78■□□□□ 0.44
RETP07949 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RETP07949 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RETP07949 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.78■□□□□ 0.44
RETP07949 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RETP07949 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RETP07949 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RETP07949 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.78■□□□□ 0.44
RETP07949 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.78■□□□□ 0.44
RETP07949 KRT18P2-201ENST00000447938 1258 ntBASIC17.78■□□□□ 0.44
RETP07949 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 ALG1L5P-201ENST00000482043 771 ntBASIC17.78■□□□□ 0.44
RETP07949 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.78■□□□□ 0.44
RETP07949 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
RETP07949 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
RETP07949 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.78■□□□□ 0.44
RETP07949 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RETP07949 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.78■□□□□ 0.44
RETP07949 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RETP07949 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RETP07949 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.77■□□□□ 0.44
RETP07949 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
RETP07949 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RETP07949 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RETP07949 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RETP07949 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.77■□□□□ 0.44
RETP07949 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RETP07949 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.77■□□□□ 0.44
RETP07949 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.77■□□□□ 0.44
RETP07949 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RETP07949 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RETP07949 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.77■□□□□ 0.44
RETP07949 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.77■□□□□ 0.44
RETP07949 KRT18P27-201ENST00000427733 1299 ntBASIC17.77■□□□□ 0.44
RETP07949 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.77■□□□□ 0.44
RETP07949 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.77■□□□□ 0.44
RETP07949 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RETP07949 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.77■□□□□ 0.44
RETP07949 AL022326.1-202ENST00000641533 845 ntBASIC17.77■□□□□ 0.44
RETP07949 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RETP07949 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.77■□□□□ 0.44
RETP07949 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RETP07949 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.77■□□□□ 0.44
RETP07949 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.77■□□□□ 0.43
RETP07949 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RETP07949 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.77■□□□□ 0.43
RETP07949 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RETP07949 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RETP07949 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RETP07949 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RETP07949 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RETP07949 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.77■□□□□ 0.43
RETP07949 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 AC020916.1-201ENST00000587762 1774 ntBASIC17.76■□□□□ 0.43
RETP07949 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.76■□□□□ 0.43
RETP07949 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RETP07949 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RETP07949 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
RETP07949 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.76■□□□□ 0.43
RETP07949 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.76■□□□□ 0.43
RETP07949 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RETP07949 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.76■□□□□ 0.43
RETP07949 MKNK2P1-201ENST00000437526 628 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms