Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TSFM-210ENST00000550559 897 ntTSL 5 BASIC23■■□□□ 1.27
COL5A2P05997 AC005225.4-201ENST00000557330 545 ntBASIC23■■□□□ 1.27
COL5A2P05997 RN7SL204P-201ENST00000582831 262 ntBASIC23■■□□□ 1.27
COL5A2P05997 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL5A2P05997 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23■■□□□ 1.27
COL5A2P05997 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
COL5A2P05997 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC23■■□□□ 1.27
COL5A2P05997 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23■■□□□ 1.27
COL5A2P05997 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC23■■□□□ 1.27
COL5A2P05997 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL5A2P05997 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL5A2P05997 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL5A2P05997 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL5A2P05997 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
COL5A2P05997 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
COL5A2P05997 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 ENSA-206ENST00000361631 725 ntTSL 2 BASIC22.99■■□□□ 1.27
COL5A2P05997 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 WRB-204ENST00000398753 699 ntTSL 3 BASIC22.99■■□□□ 1.27
COL5A2P05997 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 KLF2P3-201ENST00000451977 1087 ntBASIC22.99■■□□□ 1.27
COL5A2P05997 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC22.99■■□□□ 1.27
COL5A2P05997 FAM86C2P-203ENST00000528684 1004 ntBASIC22.99■■□□□ 1.27
COL5A2P05997 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC22.99■■□□□ 1.27
COL5A2P05997 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC22.99■■□□□ 1.27
COL5A2P05997 HARS-203ENST00000431330 1774 ntTSL 2 BASIC22.99■■□□□ 1.27
COL5A2P05997 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC22.99■■□□□ 1.27
COL5A2P05997 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC22.99■■□□□ 1.27
COL5A2P05997 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC22.99■■□□□ 1.27
COL5A2P05997 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.99■■□□□ 1.27
COL5A2P05997 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
COL5A2P05997 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
COL5A2P05997 AC005237.2-201ENST00000434368 219 ntBASIC22.98■■□□□ 1.27
COL5A2P05997 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
COL5A2P05997 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC22.98■■□□□ 1.27
COL5A2P05997 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
COL5A2P05997 AC243562.1-201ENST00000560672 389 ntBASIC22.98■■□□□ 1.27
COL5A2P05997 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
COL5A2P05997 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
COL5A2P05997 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC22.98■■□□□ 1.27
COL5A2P05997 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
COL5A2P05997 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 AL135999.2-201ENST00000622438 1686 ntBASIC22.98■■□□□ 1.27
COL5A2P05997 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC22.98■■□□□ 1.27
COL5A2P05997 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.98■■□□□ 1.27
COL5A2P05997 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.98■■□□□ 1.27
COL5A2P05997 AL592309.1-201ENST00000443127 649 ntBASIC22.98■■□□□ 1.27
COL5A2P05997 INGX-202ENST00000489074 768 ntBASIC22.98■■□□□ 1.27
COL5A2P05997 TERF1P3-201ENST00000505638 1227 ntBASIC22.98■■□□□ 1.27
COL5A2P05997 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC22.98■■□□□ 1.27
COL5A2P05997 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL5A2P05997 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL5A2P05997 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL5A2P05997 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
COL5A2P05997 AC129492.6-201ENST00000611383 1305 ntBASIC22.97■■□□□ 1.27
COL5A2P05997 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL5A2P05997 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL5A2P05997 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
COL5A2P05997 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL5A2P05997 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL5A2P05997 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL5A2P05997 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC22.97■■□□□ 1.27
COL5A2P05997 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL5A2P05997 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL5A2P05997 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
COL5A2P05997 BAD-202ENST00000394531 631 ntTSL 3 BASIC22.97■■□□□ 1.27
COL5A2P05997 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
COL5A2P05997 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC22.97■■□□□ 1.27
COL5A2P05997 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC22.97■■□□□ 1.27
COL5A2P05997 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
COL5A2P05997 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL5A2P05997 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.97■■□□□ 1.27
COL5A2P05997 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL5A2P05997 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms