Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGN1P05114 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGN1P05114 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGN1P05114 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 KRT89P-201ENST00000620027 1478 ntBASIC16.01■□□□□ 0.15
HMGN1P05114 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
HMGN1P05114 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 KRT17P2-201ENST00000300992 1314 ntBASIC16■□□□□ 0.15
HMGN1P05114 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 BX276092.7-203ENST00000637198 1536 ntBASIC16■□□□□ 0.15
HMGN1P05114 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
HMGN1P05114 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
HMGN1P05114 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16■□□□□ 0.15
HMGN1P05114 TSPY7P-201ENST00000431358 1114 ntBASIC16■□□□□ 0.15
HMGN1P05114 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16■□□□□ 0.15
HMGN1P05114 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16■□□□□ 0.15
HMGN1P05114 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16■□□□□ 0.15
HMGN1P05114 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16■□□□□ 0.15
HMGN1P05114 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16■□□□□ 0.15
HMGN1P05114 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16■□□□□ 0.15
HMGN1P05114 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16■□□□□ 0.15
HMGN1P05114 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
HMGN1P05114 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
HMGN1P05114 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGN1P05114 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HMGN1P05114 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.99■□□□□ 0.15
HMGN1P05114 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HMGN1P05114 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.99■□□□□ 0.15
HMGN1P05114 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HMGN1P05114 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HMGN1P05114 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGN1P05114 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HMGN1P05114 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGN1P05114 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HMGN1P05114 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.99■□□□□ 0.15
HMGN1P05114 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.99■□□□□ 0.15
HMGN1P05114 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.99■□□□□ 0.15
HMGN1P05114 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
HMGN1P05114 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGN1P05114 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.99■□□□□ 0.15
HMGN1P05114 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.99■□□□□ 0.15
HMGN1P05114 AC024563.2-201ENST00000603282 481 ntBASIC15.99■□□□□ 0.15
HMGN1P05114 AL157888.1-201ENST00000631930 593 ntBASIC15.99■□□□□ 0.15
HMGN1P05114 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGN1P05114 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGN1P05114 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.99■□□□□ 0.15
HMGN1P05114 KRT8P47-201ENST00000604727 1398 ntBASIC15.99■□□□□ 0.15
HMGN1P05114 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HMGN1P05114 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
HMGN1P05114 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
HMGN1P05114 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.98■□□□□ 0.15
HMGN1P05114 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HMGN1P05114 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.98■□□□□ 0.15
HMGN1P05114 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HMGN1P05114 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.98■□□□□ 0.15
HMGN1P05114 HMGA1P5-201ENST00000412453 271 ntBASIC15.98■□□□□ 0.15
HMGN1P05114 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms