Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CDKL5O76039 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.52■□□□□ 0.88
CDKL5O76039 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CDKL5O76039 AL023806.1-201ENST00000603994 1649 ntBASIC20.52■□□□□ 0.88
CDKL5O76039 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDKL5O76039 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.52■□□□□ 0.87
CDKL5O76039 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDKL5O76039 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CDKL5O76039 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CDKL5O76039 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDKL5O76039 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKL5O76039 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 MYCLP1-201ENST00000372451 1075 ntBASIC20.51■□□□□ 0.87
CDKL5O76039 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.51■□□□□ 0.87
CDKL5O76039 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKL5O76039 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CDKL5O76039 AP002414.4-201ENST00000589764 1148 ntBASIC20.51■□□□□ 0.87
CDKL5O76039 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.51■□□□□ 0.87
CDKL5O76039 AC010331.1-201ENST00000611423 582 ntBASIC20.51■□□□□ 0.87
CDKL5O76039 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKL5O76039 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 PP12613-201ENST00000424958 2230 ntBASIC20.51■□□□□ 0.87
CDKL5O76039 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKL5O76039 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDKL5O76039 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.51■□□□□ 0.87
CDKL5O76039 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDKL5O76039 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CDKL5O76039 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.5■□□□□ 0.87
CDKL5O76039 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDKL5O76039 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.5■□□□□ 0.87
CDKL5O76039 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.5■□□□□ 0.87
CDKL5O76039 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.5■□□□□ 0.87
CDKL5O76039 AC233702.3-201ENST00000578656 1387 ntBASIC20.5■□□□□ 0.87
CDKL5O76039 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKL5O76039 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKL5O76039 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
CDKL5O76039 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.5■□□□□ 0.87
CDKL5O76039 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKL5O76039 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.5■□□□□ 0.87
CDKL5O76039 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDKL5O76039 MIR1224-201ENST00000408193 85 ntBASIC20.5■□□□□ 0.87
CDKL5O76039 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.5■□□□□ 0.87
CDKL5O76039 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.5■□□□□ 0.87
CDKL5O76039 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.5■□□□□ 0.87
CDKL5O76039 TPSP2-201ENST00000561760 610 ntBASIC20.5■□□□□ 0.87
CDKL5O76039 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.5■□□□□ 0.87
CDKL5O76039 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.5■□□□□ 0.87
CDKL5O76039 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CDKL5O76039 AC069148.1-201ENST00000608741 768 ntBASIC20.5■□□□□ 0.87
CDKL5O76039 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.5■□□□□ 0.87
CDKL5O76039 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CDKL5O76039 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.5■□□□□ 0.87
CDKL5O76039 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKL5O76039 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDKL5O76039 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDKL5O76039 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDKL5O76039 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKL5O76039 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL5O76039 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL5O76039 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL5O76039 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CDKL5O76039 AC141586.5-201ENST00000624546 2050 ntBASIC20.49■□□□□ 0.87
CDKL5O76039 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.49■□□□□ 0.87
CDKL5O76039 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.49■□□□□ 0.87
CDKL5O76039 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL5O76039 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.49■□□□□ 0.87
CDKL5O76039 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CDKL5O76039 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL5O76039 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL5O76039 AC103564.2-201ENST00000432853 1299 ntBASIC20.49■□□□□ 0.87
CDKL5O76039 AP002383.4-201ENST00000442518 975 ntBASIC20.49■□□□□ 0.87
CDKL5O76039 IGHV3-52-201ENST00000519770 353 ntBASIC20.49■□□□□ 0.87
CDKL5O76039 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.49■□□□□ 0.87
CDKL5O76039 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKL5O76039 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKL5O76039 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDKL5O76039 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.49■□□□□ 0.87
CDKL5O76039 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.49■□□□□ 0.87
CDKL5O76039 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.49■□□□□ 0.87
CDKL5O76039 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.49■□□□□ 0.87
CDKL5O76039 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms