Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.54■□□□□ 0.4
SUPT3HO75486 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUPT3HO75486 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.54■□□□□ 0.4
SUPT3HO75486 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SUPT3HO75486 AC073912.3-201ENST00000624414 853 ntBASIC17.54■□□□□ 0.4
SUPT3HO75486 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.54■□□□□ 0.4
SUPT3HO75486 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.54■□□□□ 0.4
SUPT3HO75486 KRT89P-201ENST00000620027 1478 ntBASIC17.54■□□□□ 0.4
SUPT3HO75486 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SUPT3HO75486 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUPT3HO75486 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SUPT3HO75486 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUPT3HO75486 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.54■□□□□ 0.4
SUPT3HO75486 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUPT3HO75486 CICP6-201ENST00000457191 2729 ntBASIC17.54■□□□□ 0.4
SUPT3HO75486 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUPT3HO75486 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUPT3HO75486 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SUPT3HO75486 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SUPT3HO75486 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.54■□□□□ 0.4
SUPT3HO75486 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.53■□□□□ 0.4
SUPT3HO75486 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.53■□□□□ 0.4
SUPT3HO75486 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.53■□□□□ 0.4
SUPT3HO75486 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.53■□□□□ 0.4
SUPT3HO75486 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SUPT3HO75486 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 AC133963.1-201ENST00000504166 1679 ntBASIC17.53■□□□□ 0.4
SUPT3HO75486 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 KRT18P48-201ENST00000434763 852 ntBASIC17.53■□□□□ 0.4
SUPT3HO75486 KRT18P65-201ENST00000439811 1286 ntBASIC17.53■□□□□ 0.4
SUPT3HO75486 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 AC139887.4-201ENST00000607877 719 ntBASIC17.53■□□□□ 0.4
SUPT3HO75486 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SUPT3HO75486 AC011558.1-201ENST00000623459 338 ntBASIC17.53■□□□□ 0.4
SUPT3HO75486 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.53■□□□□ 0.4
SUPT3HO75486 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SUPT3HO75486 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SUPT3HO75486 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.53■□□□□ 0.4
SUPT3HO75486 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SUPT3HO75486 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SUPT3HO75486 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SUPT3HO75486 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SUPT3HO75486 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SUPT3HO75486 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.52■□□□□ 0.4
SUPT3HO75486 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUPT3HO75486 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.52■□□□□ 0.4
SUPT3HO75486 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUPT3HO75486 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SUPT3HO75486 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SUPT3HO75486 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.52■□□□□ 0.4
SUPT3HO75486 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUPT3HO75486 TERF1P1-201ENST00000311003 1181 ntBASIC17.52■□□□□ 0.4
SUPT3HO75486 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SUPT3HO75486 FAM8A6P-201ENST00000407496 1135 ntBASIC17.52■□□□□ 0.4
SUPT3HO75486 YBX1P2-201ENST00000489612 999 ntBASIC17.52■□□□□ 0.4
SUPT3HO75486 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.52■□□□□ 0.4
SUPT3HO75486 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.52■□□□□ 0.4
SUPT3HO75486 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.52■□□□□ 0.4
SUPT3HO75486 AC004263.2-201ENST00000617183 678 ntBASIC17.52■□□□□ 0.4
SUPT3HO75486 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUPT3HO75486 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUPT3HO75486 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SUPT3HO75486 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.52■□□□□ 0.4
SUPT3HO75486 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SUPT3HO75486 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SUPT3HO75486 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SUPT3HO75486 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SUPT3HO75486 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.51■□□□□ 0.39
SUPT3HO75486 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SUPT3HO75486 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.51■□□□□ 0.39
SUPT3HO75486 STARP1-201ENST00000397973 869 ntBASIC17.51■□□□□ 0.39
SUPT3HO75486 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 BX664615.1-201ENST00000443558 458 ntBASIC17.51■□□□□ 0.39
SUPT3HO75486 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.51■□□□□ 0.39
SUPT3HO75486 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.51■□□□□ 0.39
SUPT3HO75486 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
SUPT3HO75486 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUPT3HO75486 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SUPT3HO75486 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms