Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH4O75427 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LRCH4O75427 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH4O75427 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH4O75427 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH4O75427 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH4O75427 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.35■□□□□ 0.53
LRCH4O75427 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRCH4O75427 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH4O75427 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH4O75427 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LRCH4O75427 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LRCH4O75427 AC122714.2-201ENST00000502787 707 ntBASIC18.35■□□□□ 0.53
LRCH4O75427 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.35■□□□□ 0.53
LRCH4O75427 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.35■□□□□ 0.53
LRCH4O75427 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.35■□□□□ 0.53
LRCH4O75427 AP002414.4-201ENST00000589764 1148 ntBASIC18.35■□□□□ 0.53
LRCH4O75427 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH4O75427 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH4O75427 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.35■□□□□ 0.53
LRCH4O75427 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRCH4O75427 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH4O75427 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH4O75427 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH4O75427 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.35■□□□□ 0.53
LRCH4O75427 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.35■□□□□ 0.53
LRCH4O75427 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH4O75427 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH4O75427 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRCH4O75427 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.34■□□□□ 0.53
LRCH4O75427 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LRCH4O75427 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRCH4O75427 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LRCH4O75427 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.34■□□□□ 0.53
LRCH4O75427 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LRCH4O75427 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.34■□□□□ 0.53
LRCH4O75427 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRCH4O75427 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
LRCH4O75427 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.34■□□□□ 0.53
LRCH4O75427 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.34■□□□□ 0.53
LRCH4O75427 VENTXP7-201ENST00000475503 772 ntBASIC18.34■□□□□ 0.53
LRCH4O75427 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.34■□□□□ 0.53
LRCH4O75427 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LRCH4O75427 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH4O75427 AL049757.1-201ENST00000616842 1596 ntBASIC18.34■□□□□ 0.53
LRCH4O75427 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRCH4O75427 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.33■□□□□ 0.53
LRCH4O75427 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
LRCH4O75427 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRCH4O75427 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRCH4O75427 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
LRCH4O75427 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.33■□□□□ 0.53
LRCH4O75427 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRCH4O75427 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRCH4O75427 BCL2-203ENST00000589955 5011 ntBASIC18.33■□□□□ 0.53
LRCH4O75427 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.33■□□□□ 0.53
LRCH4O75427 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRCH4O75427 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
LRCH4O75427 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.33■□□□□ 0.53
LRCH4O75427 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.33■□□□□ 0.53
LRCH4O75427 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRCH4O75427 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LRCH4O75427 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH4O75427 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.33■□□□□ 0.52
LRCH4O75427 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.33■□□□□ 0.52
LRCH4O75427 FAM220CP-201ENST00000395253 831 ntBASIC18.33■□□□□ 0.52
LRCH4O75427 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH4O75427 TOB2P1-201ENST00000469761 992 ntBASIC18.33■□□□□ 0.52
LRCH4O75427 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.33■□□□□ 0.52
LRCH4O75427 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH4O75427 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.33■□□□□ 0.52
LRCH4O75427 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.33■□□□□ 0.52
LRCH4O75427 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.33■□□□□ 0.52
LRCH4O75427 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.33■□□□□ 0.52
LRCH4O75427 AC109462.3-201ENST00000573934 613 ntBASIC18.33■□□□□ 0.52
LRCH4O75427 MIR3180-1-201ENST00000580374 94 ntBASIC18.33■□□□□ 0.52
LRCH4O75427 MIR3180-3-201ENST00000584616 94 ntBASIC18.33■□□□□ 0.52
LRCH4O75427 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LRCH4O75427 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.33■□□□□ 0.52
LRCH4O75427 NPAP1P7-201ENST00000613027 823 ntBASIC18.33■□□□□ 0.52
LRCH4O75427 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH4O75427 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH4O75427 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.33■□□□□ 0.52
LRCH4O75427 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH4O75427 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LRCH4O75427 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.33■□□□□ 0.52
LRCH4O75427 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms