Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.4■□□□□ 0.38
SNX3O60493 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX3O60493 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX3O60493 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SNX3O60493 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX3O60493 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX3O60493 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNX3O60493 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX3O60493 AC011506.1-201ENST00000474329 610 ntBASIC17.4■□□□□ 0.38
SNX3O60493 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.4■□□□□ 0.38
SNX3O60493 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SNX3O60493 AC098934.4-201ENST00000564127 592 ntBASIC17.4■□□□□ 0.38
SNX3O60493 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.4■□□□□ 0.38
SNX3O60493 AC022517.1-201ENST00000592429 346 ntBASIC17.4■□□□□ 0.38
SNX3O60493 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.4■□□□□ 0.38
SNX3O60493 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SNX3O60493 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
SNX3O60493 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNX3O60493 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNX3O60493 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.4■□□□□ 0.38
SNX3O60493 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX3O60493 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNX3O60493 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SNX3O60493 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.4■□□□□ 0.38
SNX3O60493 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
SNX3O60493 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SNX3O60493 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNX3O60493 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNX3O60493 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNX3O60493 LINC00167-201ENST00000530583 1419 ntBASIC17.39■□□□□ 0.38
SNX3O60493 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX3O60493 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.39■□□□□ 0.37
SNX3O60493 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX3O60493 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SNX3O60493 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SNX3O60493 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX3O60493 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.39■□□□□ 0.37
SNX3O60493 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SNX3O60493 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX3O60493 KRASP1-201ENST00000407852 552 ntBASIC17.39■□□□□ 0.37
SNX3O60493 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SNX3O60493 AC008403.3-201ENST00000598924 454 ntBASIC17.39■□□□□ 0.37
SNX3O60493 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.39■□□□□ 0.37
SNX3O60493 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX3O60493 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX3O60493 AL023875.1-201ENST00000640777 796 ntBASIC17.39■□□□□ 0.37
SNX3O60493 AL031985.4-201ENST00000642138 673 ntBASIC17.39■□□□□ 0.37
SNX3O60493 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX3O60493 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX3O60493 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX3O60493 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX3O60493 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX3O60493 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX3O60493 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SNX3O60493 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.39■□□□□ 0.37
SNX3O60493 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.39■□□□□ 0.37
SNX3O60493 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SNX3O60493 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SNX3O60493 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNX3O60493 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNX3O60493 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX3O60493 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX3O60493 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.38■□□□□ 0.37
SNX3O60493 PAUPAR-201ENST00000630360 2965 ntBASIC17.38■□□□□ 0.37
SNX3O60493 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX3O60493 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SNX3O60493 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.38■□□□□ 0.37
SNX3O60493 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNX3O60493 OR6D1P-203ENST00000641209 4860 ntBASIC17.38■□□□□ 0.37
SNX3O60493 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SNX3O60493 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX3O60493 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX3O60493 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SNX3O60493 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SNX3O60493 AP002982.1-201ENST00000492365 877 ntBASIC17.38■□□□□ 0.37
SNX3O60493 MIR3180-4-201ENST00000582223 153 ntBASIC17.38■□□□□ 0.37
SNX3O60493 MIR4674-201ENST00000582457 87 ntBASIC17.38■□□□□ 0.37
SNX3O60493 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.38■□□□□ 0.37
SNX3O60493 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNX3O60493 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms