Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PHGDHO43175 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHGDHO43175 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.58■□□□□ 0.4
PHGDHO43175 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHGDHO43175 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.58■□□□□ 0.4
PHGDHO43175 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHGDHO43175 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.58■□□□□ 0.4
PHGDHO43175 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.58■□□□□ 0.4
PHGDHO43175 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
PHGDHO43175 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PHGDHO43175 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.57■□□□□ 0.4
PHGDHO43175 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.57■□□□□ 0.4
PHGDHO43175 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.57■□□□□ 0.4
PHGDHO43175 AL353692.3-201ENST00000407031 1396 ntBASIC17.57■□□□□ 0.4
PHGDHO43175 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PHGDHO43175 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.57■□□□□ 0.4
PHGDHO43175 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PHGDHO43175 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PHGDHO43175 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.57■□□□□ 0.4
PHGDHO43175 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.57■□□□□ 0.4
PHGDHO43175 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.57■□□□□ 0.4
PHGDHO43175 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.57■□□□□ 0.4
PHGDHO43175 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.57■□□□□ 0.4
PHGDHO43175 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.57■□□□□ 0.4
PHGDHO43175 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.57■□□□□ 0.4
PHGDHO43175 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
PHGDHO43175 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PHGDHO43175 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
PHGDHO43175 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PHGDHO43175 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.56■□□□□ 0.4
PHGDHO43175 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.56■□□□□ 0.4
PHGDHO43175 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PHGDHO43175 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PHGDHO43175 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.56■□□□□ 0.4
PHGDHO43175 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.56■□□□□ 0.4
PHGDHO43175 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PHGDHO43175 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.56■□□□□ 0.4
PHGDHO43175 AL359075.1-203ENST00000462729 1002 ntBASIC17.56■□□□□ 0.4
PHGDHO43175 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.56■□□□□ 0.4
PHGDHO43175 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.56■□□□□ 0.4
PHGDHO43175 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PHGDHO43175 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.56■□□□□ 0.4
PHGDHO43175 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PHGDHO43175 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PHGDHO43175 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PHGDHO43175 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.55■□□□□ 0.4
PHGDHO43175 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PHGDHO43175 MIR662-201ENST00000384847 95 ntBASIC17.55■□□□□ 0.4
PHGDHO43175 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 VENTXP5-201ENST00000523979 775 ntBASIC17.55■□□□□ 0.4
PHGDHO43175 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.55■□□□□ 0.4
PHGDHO43175 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.55■□□□□ 0.4
PHGDHO43175 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.55■□□□□ 0.4
PHGDHO43175 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.55■□□□□ 0.4
PHGDHO43175 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.55■□□□□ 0.4
PHGDHO43175 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PHGDHO43175 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PHGDHO43175 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHGDHO43175 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms