Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KPNA4O00629 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KPNA4O00629 AL024508.2-201ENST00000607749 1894 ntBASIC16.55■□□□□ 0.24
KPNA4O00629 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
KPNA4O00629 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KPNA4O00629 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.55■□□□□ 0.24
KPNA4O00629 MMP23A-201ENST00000234610 1017 ntBASIC16.55■□□□□ 0.24
KPNA4O00629 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.55■□□□□ 0.24
KPNA4O00629 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KPNA4O00629 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.55■□□□□ 0.24
KPNA4O00629 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.55■□□□□ 0.24
KPNA4O00629 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.55■□□□□ 0.24
KPNA4O00629 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.55■□□□□ 0.24
KPNA4O00629 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.55■□□□□ 0.24
KPNA4O00629 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KPNA4O00629 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.55■□□□□ 0.24
KPNA4O00629 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.55■□□□□ 0.24
KPNA4O00629 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
KPNA4O00629 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
KPNA4O00629 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KPNA4O00629 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KPNA4O00629 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KPNA4O00629 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KPNA4O00629 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KPNA4O00629 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KPNA4O00629 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
KPNA4O00629 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
KPNA4O00629 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.55■□□□□ 0.24
KPNA4O00629 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KPNA4O00629 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KPNA4O00629 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KPNA4O00629 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.55■□□□□ 0.24
KPNA4O00629 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
KPNA4O00629 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.55■□□□□ 0.24
KPNA4O00629 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.54■□□□□ 0.24
KPNA4O00629 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.54■□□□□ 0.24
KPNA4O00629 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.54■□□□□ 0.24
KPNA4O00629 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KPNA4O00629 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KPNA4O00629 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KPNA4O00629 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KPNA4O00629 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KPNA4O00629 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
KPNA4O00629 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KPNA4O00629 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
KPNA4O00629 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.54■□□□□ 0.24
KPNA4O00629 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.54■□□□□ 0.24
KPNA4O00629 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.54■□□□□ 0.24
KPNA4O00629 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.54■□□□□ 0.24
KPNA4O00629 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 AC093010.1-201ENST00000473625 1624 ntBASIC16.54■□□□□ 0.24
KPNA4O00629 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KPNA4O00629 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KPNA4O00629 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.54■□□□□ 0.24
KPNA4O00629 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.54■□□□□ 0.24
KPNA4O00629 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 DOC2GP-204ENST00000639052 2548 ntBASIC16.54■□□□□ 0.24
KPNA4O00629 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KPNA4O00629 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.54■□□□□ 0.24
KPNA4O00629 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KPNA4O00629 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.53■□□□□ 0.24
KPNA4O00629 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.53■□□□□ 0.24
KPNA4O00629 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KPNA4O00629 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KPNA4O00629 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KPNA4O00629 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KPNA4O00629 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KPNA4O00629 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.53■□□□□ 0.24
KPNA4O00629 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.53■□□□□ 0.24
KPNA4O00629 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KPNA4O00629 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KPNA4O00629 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KPNA4O00629 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KPNA4O00629 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.53■□□□□ 0.24
KPNA4O00629 PCDHA1-201ENST00000378133 2726 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms