Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TAF4O00268 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TAF4O00268 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TAF4O00268 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TAF4O00268 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TAF4O00268 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TAF4O00268 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TAF4O00268 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TAF4O00268 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.3■□□□□ 0.36
TAF4O00268 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.3■□□□□ 0.36
TAF4O00268 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.3■□□□□ 0.36
TAF4O00268 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.3■□□□□ 0.36
TAF4O00268 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.3■□□□□ 0.36
TAF4O00268 AC007967.2-201ENST00000432613 625 ntBASIC17.3■□□□□ 0.36
TAF4O00268 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.3■□□□□ 0.36
TAF4O00268 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
TAF4O00268 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.3■□□□□ 0.36
TAF4O00268 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.3■□□□□ 0.36
TAF4O00268 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.3■□□□□ 0.36
TAF4O00268 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TAF4O00268 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.3■□□□□ 0.36
TAF4O00268 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TAF4O00268 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.3■□□□□ 0.36
TAF4O00268 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TAF4O00268 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TAF4O00268 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.29■□□□□ 0.36
TAF4O00268 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.29■□□□□ 0.36
TAF4O00268 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.29■□□□□ 0.36
TAF4O00268 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 MIR770-201ENST00000390219 98 ntBASIC17.29■□□□□ 0.36
TAF4O00268 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.29■□□□□ 0.36
TAF4O00268 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.29■□□□□ 0.36
TAF4O00268 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.29■□□□□ 0.36
TAF4O00268 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TAF4O00268 MIR1199-201ENST00000621445 119 ntBASIC17.29■□□□□ 0.36
TAF4O00268 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.29■□□□□ 0.36
TAF4O00268 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.29■□□□□ 0.36
TAF4O00268 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.29■□□□□ 0.36
TAF4O00268 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.29■□□□□ 0.36
TAF4O00268 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TAF4O00268 AC011270.2-201ENST00000624293 2550 ntBASIC17.29■□□□□ 0.36
TAF4O00268 AC067852.2-201ENST00000590513 2313 ntBASIC17.29■□□□□ 0.36
TAF4O00268 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.28■□□□□ 0.36
TAF4O00268 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TAF4O00268 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TAF4O00268 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TAF4O00268 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.28■□□□□ 0.36
TAF4O00268 AC008556.1-201ENST00000610908 2040 ntBASIC17.28■□□□□ 0.36
TAF4O00268 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TAF4O00268 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TAF4O00268 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TAF4O00268 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TAF4O00268 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
TAF4O00268 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TAF4O00268 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TAF4O00268 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.28■□□□□ 0.36
TAF4O00268 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.28■□□□□ 0.36
TAF4O00268 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TAF4O00268 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TAF4O00268 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.28■□□□□ 0.36
TAF4O00268 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.28■□□□□ 0.36
TAF4O00268 UNC93B6-202ENST00000528242 690 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms