Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TP73-211ENST00000604074 4806 ntTSL 5 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
CHKB-CPT1BH3BT56 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 AC026691.1-201ENST00000602502 2017 ntBASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 SMUG1P1-201ENST00000590640 811 ntBASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 AC099791.2-201ENST00000605725 427 ntBASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 RARRES2P11-201ENST00000635158 484 ntBASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 KRT8P17-201ENST00000453110 1448 ntBASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 AC092053.3-201ENST00000641308 4975 ntBASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 AC144831.1-201ENST00000573312 2656 ntBASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC9.79□□□□□ -0.84
CHKB-CPT1BH3BT56 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 COBL-210ENST00000632460 1941 ntTSL 5 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 AC138028.4-201ENST00000564984 1845 ntBASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
CHKB-CPT1BH3BT56 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms