Protein–RNA interactions for Protein: A6NGJ6

TRIM64, Tripartite motif-containing protein 64, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM64A6NGJ6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 AC117947.1-201ENST00000427448 529 ntBASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 AC011506.1-201ENST00000474329 610 ntBASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 AC128688.1-201ENST00000487626 519 ntBASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 KRT18P56-201ENST00000507275 550 ntBASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 C1QL1P1-201ENST00000568105 661 ntBASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 AL445675.2-201ENST00000620291 557 ntBASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM64A6NGJ6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 DGCR10-201ENST00000609839 495 ntBASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 RCC2P3-201ENST00000418112 1537 ntBASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM64A6NGJ6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 CROCCP1-201ENST00000426910 5675 ntBASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 AC139887.4-201ENST00000607877 719 ntBASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM64A6NGJ6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms