Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIT2A6NDA9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.77■□□□□ 0.28
LRIT2A6NDA9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRIT2A6NDA9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LRIT2A6NDA9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRIT2A6NDA9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRIT2A6NDA9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRIT2A6NDA9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRIT2A6NDA9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
LRIT2A6NDA9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRIT2A6NDA9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRIT2A6NDA9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.27
LRIT2A6NDA9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRIT2A6NDA9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRIT2A6NDA9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.77■□□□□ 0.27
LRIT2A6NDA9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 IGHV3-52-201ENST00000519770 353 ntBASIC16.76■□□□□ 0.27
LRIT2A6NDA9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 MIR5100-201ENST00000579544 119 ntBASIC16.76■□□□□ 0.27
LRIT2A6NDA9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT2A6NDA9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 LTB4R2-202ENST00000528054 3092 ntBASIC16.75■□□□□ 0.27
LRIT2A6NDA9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 NUS1P2-201ENST00000417358 873 ntBASIC16.75■□□□□ 0.27
LRIT2A6NDA9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 KRT16P4-201ENST00000453883 522 ntBASIC16.75■□□□□ 0.27
LRIT2A6NDA9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 FOSL1P1-201ENST00000511041 816 ntBASIC16.75■□□□□ 0.27
LRIT2A6NDA9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 AC138894.3-201ENST00000603787 634 ntBASIC16.75■□□□□ 0.27
LRIT2A6NDA9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 PP12613-201ENST00000424958 2230 ntBASIC16.75■□□□□ 0.27
LRIT2A6NDA9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 KRT8P10-201ENST00000450021 1447 ntBASIC16.75■□□□□ 0.27
LRIT2A6NDA9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 LYSMD4-203ENST00000378904 2122 ntBASIC16.75■□□□□ 0.27
LRIT2A6NDA9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT2A6NDA9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIT2A6NDA9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRIT2A6NDA9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms