Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 GPX1P2-201ENST00000429271 606 ntBASIC18.38■□□□□ 0.53
YIPF1Q9Y548 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 MIR4751-201ENST00000578027 74 ntBASIC18.38■□□□□ 0.53
YIPF1Q9Y548 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 AC097637.2-201ENST00000624096 1997 ntBASIC18.38■□□□□ 0.53
YIPF1Q9Y548 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
YIPF1Q9Y548 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 AC023274.1-201ENST00000418278 595 ntBASIC18.37■□□□□ 0.53
YIPF1Q9Y548 AC005104.2-201ENST00000427818 678 ntBASIC18.37■□□□□ 0.53
YIPF1Q9Y548 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 IGHV3-65-201ENST00000523210 341 ntBASIC18.37■□□□□ 0.53
YIPF1Q9Y548 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 AC002347.1-201ENST00000569543 541 ntBASIC18.37■□□□□ 0.53
YIPF1Q9Y548 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 AC008667.4-201ENST00000607370 168 ntBASIC18.37■□□□□ 0.53
YIPF1Q9Y548 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
YIPF1Q9Y548 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 RPSAP43-201ENST00000402237 625 ntBASIC18.36■□□□□ 0.53
YIPF1Q9Y548 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 AC004832.2-201ENST00000426397 482 ntBASIC18.36■□□□□ 0.53
YIPF1Q9Y548 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 DNAJB3-201ENST00000446806 729 ntBASIC18.36■□□□□ 0.53
YIPF1Q9Y548 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 AL353135.1-201ENST00000606729 504 ntBASIC18.36■□□□□ 0.53
YIPF1Q9Y548 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 AL805961.1-202ENST00000641562 540 ntBASIC18.36■□□□□ 0.53
YIPF1Q9Y548 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
YIPF1Q9Y548 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 AC138028.4-201ENST00000564984 1845 ntBASIC18.35■□□□□ 0.53
YIPF1Q9Y548 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 LINC00982-205ENST00000420957 435 ntBASIC18.35■□□□□ 0.53
YIPF1Q9Y548 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.35■□□□□ 0.53
YIPF1Q9Y548 KRT18P2-201ENST00000447938 1258 ntBASIC18.35■□□□□ 0.53
YIPF1Q9Y548 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms