Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HACD3Q9P035 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HACD3Q9P035 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.9■□□□□ 0.46
HACD3Q9P035 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HACD3Q9P035 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.9■□□□□ 0.46
HACD3Q9P035 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.9■□□□□ 0.46
HACD3Q9P035 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HACD3Q9P035 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.9■□□□□ 0.46
HACD3Q9P035 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HACD3Q9P035 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
HACD3Q9P035 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HACD3Q9P035 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HACD3Q9P035 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 AC096633.1-201ENST00000422446 749 ntBASIC17.89■□□□□ 0.45
HACD3Q9P035 DRAXINP1-201ENST00000437611 948 ntBASIC17.89■□□□□ 0.45
HACD3Q9P035 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.89■□□□□ 0.45
HACD3Q9P035 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HACD3Q9P035 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
HACD3Q9P035 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 KRT18P1-202ENST00000452408 1331 ntBASIC17.89■□□□□ 0.45
HACD3Q9P035 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HACD3Q9P035 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.89■□□□□ 0.45
HACD3Q9P035 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HACD3Q9P035 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HACD3Q9P035 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.89■□□□□ 0.45
HACD3Q9P035 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 AC134043.2-201ENST00000624206 2238 ntBASIC17.88■□□□□ 0.45
HACD3Q9P035 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.88■□□□□ 0.45
HACD3Q9P035 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.88■□□□□ 0.45
HACD3Q9P035 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.88■□□□□ 0.45
HACD3Q9P035 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.88■□□□□ 0.45
HACD3Q9P035 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.88■□□□□ 0.45
HACD3Q9P035 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.88■□□□□ 0.45
HACD3Q9P035 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HACD3Q9P035 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
HACD3Q9P035 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HACD3Q9P035 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
HACD3Q9P035 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HACD3Q9P035 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HACD3Q9P035 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.88■□□□□ 0.45
HACD3Q9P035 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.88■□□□□ 0.45
HACD3Q9P035 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.88■□□□□ 0.45
HACD3Q9P035 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.88■□□□□ 0.45
HACD3Q9P035 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.88■□□□□ 0.45
HACD3Q9P035 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.88■□□□□ 0.45
HACD3Q9P035 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HACD3Q9P035 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.88■□□□□ 0.45
HACD3Q9P035 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 OR6D1P-203ENST00000641209 4860 ntBASIC17.88■□□□□ 0.45
HACD3Q9P035 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.88■□□□□ 0.45
HACD3Q9P035 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HACD3Q9P035 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.88■□□□□ 0.45
HACD3Q9P035 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HACD3Q9P035 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HACD3Q9P035 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HACD3Q9P035 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms