Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 RNF152P1-201ENST00000397754 604 ntBASIC16.49■□□□□ 0.23
RLIMQ9NVW2 AL359075.1-203ENST00000462729 1002 ntBASIC16.49■□□□□ 0.23
RLIMQ9NVW2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 LINC00304-203ENST00000565008 1864 ntBASIC16.48■□□□□ 0.23
RLIMQ9NVW2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 FAM8A6P-201ENST00000407496 1135 ntBASIC16.48■□□□□ 0.23
RLIMQ9NVW2 KRT18P48-201ENST00000434763 852 ntBASIC16.48■□□□□ 0.23
RLIMQ9NVW2 KRT18P65-201ENST00000439811 1286 ntBASIC16.48■□□□□ 0.23
RLIMQ9NVW2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 LINC01023-201ENST00000606054 436 ntBASIC16.48■□□□□ 0.23
RLIMQ9NVW2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RLIMQ9NVW2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 AK4P3-201ENST00000418260 669 ntBASIC16.47■□□□□ 0.23
RLIMQ9NVW2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RLIMQ9NVW2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms