Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 GCSHP2-201ENST00000560971 527 ntBASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 AL441883.1-201ENST00000566170 1045 ntBASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 AC010240.3-201ENST00000607688 395 ntBASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 AC011558.1-201ENST00000623459 338 ntBASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 AL121761.2-201ENST00000598007 1648 ntBASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 AC080080.1-201ENST00000625121 2420 ntBASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 LINC00602-201ENST00000629776 2065 ntBASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 PCDHA12-202ENST00000613593 2588 ntBASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 AC104076.2-201ENST00000448912 469 ntBASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 DUX4L26-201ENST00000489078 1255 ntBASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.71□□□□□ -0.05
LIN7CQ9NUP9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 AC132938.6-201ENST00000623828 1655 ntBASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
LIN7CQ9NUP9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 HLA-J-201ENST00000462773 1622 ntBASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 AP001094.4-201ENST00000579008 2176 ntBASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LIN7CQ9NUP9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms