Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BCAS3Q9H6U6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 RPS2P28-201ENST00000314255 741 ntBASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 PMS2P1-201ENST00000431037 1228 ntBASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 AC145285.3-201ENST00000564603 959 ntBASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BCAS3Q9H6U6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 AC105339.3-201ENST00000560043 636 ntBASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 AC109462.3-201ENST00000573934 613 ntBASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 AC117500.6-201ENST00000624871 588 ntBASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 AL022326.1-202ENST00000641533 845 ntBASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 SIGLEC16-201ENST00000599858 1437 ntBASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.81■□□□□ 0.76
BCAS3Q9H6U6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 AC073621.1-201ENST00000392730 636 ntBASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 KRT18P58-201ENST00000527480 1120 ntBASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 FZD10-202ENST00000539839 3282 ntBASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BCAS3Q9H6U6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 NOC2LP2-201ENST00000407594 1944 ntBASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 PRYP5-201ENST00000451909 266 ntBASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 UNC93B6-202ENST00000528242 690 ntBASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BCAS3Q9H6U6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms