Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 AC009102.3-201ENST00000623118 1491 ntBASIC16.85■□□□□ 0.29
VCX3BQ9H321 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.85■□□□□ 0.29
VCX3BQ9H321 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VCX3BQ9H321 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.84■□□□□ 0.29
VCX3BQ9H321 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 AC016396.2-201ENST00000562575 1417 ntBASIC16.84■□□□□ 0.29
VCX3BQ9H321 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 AC099063.4-201ENST00000641099 1602 ntBASIC16.84■□□□□ 0.29
VCX3BQ9H321 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VCX3BQ9H321 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.84■□□□□ 0.29
VCX3BQ9H321 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
VCX3BQ9H321 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.83■□□□□ 0.29
VCX3BQ9H321 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VCX3BQ9H321 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VCX3BQ9H321 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VCX3BQ9H321 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
VCX3BQ9H321 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VCX3BQ9H321 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VCX3BQ9H321 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
VCX3BQ9H321 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3BQ9H321 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.83■□□□□ 0.28
VCX3BQ9H321 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3BQ9H321 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3BQ9H321 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3BQ9H321 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3BQ9H321 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VCX3BQ9H321 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3BQ9H321 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VCX3BQ9H321 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.82■□□□□ 0.28
VCX3BQ9H321 SDHAP2-201ENST00000455183 2001 ntBASIC16.82■□□□□ 0.28
VCX3BQ9H321 AC005915.1-201ENST00000624912 2018 ntBASIC16.82■□□□□ 0.28
VCX3BQ9H321 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.82■□□□□ 0.28
VCX3BQ9H321 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.82■□□□□ 0.28
VCX3BQ9H321 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCX3BQ9H321 KRT8P50-201ENST00000562022 1438 ntBASIC16.82■□□□□ 0.28
VCX3BQ9H321 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms