Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 APTR-203ENST00000430801 583 ntTSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 AC093787.1-201ENST00000450396 207 ntBASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 NME6-213ENST00000451657 871 ntTSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 PRSS44-201ENST00000515154 1146 ntBASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 AL391005.1-201ENST00000623953 2435 ntBASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 HYMAI-201ENST00000635591 3347 ntBASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
LCE3DQ9BYE3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
LCE3DQ9BYE3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
LCE3DQ9BYE3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC4.77□□□□□ -1.65
LCE3DQ9BYE3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms