Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
LRRC3Q9BY71 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 AC006504.4-201ENST00000592118 1568 ntBASIC18.38■□□□□ 0.53
LRRC3Q9BY71 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 DDX43P3-201ENST00000441064 443 ntBASIC18.38■□□□□ 0.53
LRRC3Q9BY71 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.38■□□□□ 0.53
LRRC3Q9BY71 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 AC109462.3-201ENST00000573934 613 ntBASIC18.38■□□□□ 0.53
LRRC3Q9BY71 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 AC005593.1-201ENST00000624894 515 ntBASIC18.38■□□□□ 0.53
LRRC3Q9BY71 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC3Q9BY71 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 AC026471.1-201ENST00000564629 3026 ntBASIC18.37■□□□□ 0.53
LRRC3Q9BY71 AC020763.4-201ENST00000623414 4170 ntBASIC18.37■□□□□ 0.53
LRRC3Q9BY71 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 AC003669.1-201ENST00000334569 611 ntBASIC18.37■□□□□ 0.53
LRRC3Q9BY71 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 YBX2P1-201ENST00000394192 760 ntBASIC18.37■□□□□ 0.53
LRRC3Q9BY71 RPSAP43-201ENST00000402237 625 ntBASIC18.37■□□□□ 0.53
LRRC3Q9BY71 ELK2BP-201ENST00000415014 1224 ntBASIC18.37■□□□□ 0.53
LRRC3Q9BY71 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 UPF3AP3-201ENST00000420996 769 ntBASIC18.37■□□□□ 0.53
LRRC3Q9BY71 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 AC040169.1-201ENST00000565382 521 ntBASIC18.37■□□□□ 0.53
LRRC3Q9BY71 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 STK25P1-201ENST00000585406 838 ntBASIC18.37■□□□□ 0.53
LRRC3Q9BY71 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC3Q9BY71 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC3Q9BY71 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms