Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC11.76□□□□□ -0.53
LITAFQ99732 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC11.76□□□□□ -0.53
LITAFQ99732 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
LITAFQ99732 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.76□□□□□ -0.53
LITAFQ99732 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
LITAFQ99732 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
LITAFQ99732 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.76□□□□□ -0.53
LITAFQ99732 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC11.76□□□□□ -0.53
LITAFQ99732 AC008040.2-201ENST00000461049 708 ntBASIC11.76□□□□□ -0.53
LITAFQ99732 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC11.76□□□□□ -0.53
LITAFQ99732 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC11.76□□□□□ -0.53
LITAFQ99732 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC11.76□□□□□ -0.53
LITAFQ99732 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
LITAFQ99732 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC11.76□□□□□ -0.53
LITAFQ99732 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
LITAFQ99732 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC11.76□□□□□ -0.53
LITAFQ99732 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.76□□□□□ -0.53
LITAFQ99732 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.76□□□□□ -0.53
LITAFQ99732 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC11.75□□□□□ -0.53
LITAFQ99732 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 AC092364.2-201ENST00000596710 2692 ntBASIC11.75□□□□□ -0.53
LITAFQ99732 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LITAFQ99732 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC11.75□□□□□ -0.53
LITAFQ99732 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC11.75□□□□□ -0.53
LITAFQ99732 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC11.75□□□□□ -0.53
LITAFQ99732 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LITAFQ99732 MIR638-201ENST00000385237 100 ntBASIC11.75□□□□□ -0.53
LITAFQ99732 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC11.75□□□□□ -0.53
LITAFQ99732 PPP1R14BP5-201ENST00000440334 435 ntBASIC11.75□□□□□ -0.53
LITAFQ99732 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC11.75□□□□□ -0.53
LITAFQ99732 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC11.75□□□□□ -0.53
LITAFQ99732 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 OAS3-207ENST00000551007 998 ntTSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC11.75□□□□□ -0.53
LITAFQ99732 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
LITAFQ99732 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC11.75□□□□□ -0.53
LITAFQ99732 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.75□□□□□ -0.53
LITAFQ99732 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LITAFQ99732 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.75□□□□□ -0.53
LITAFQ99732 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.74□□□□□ -0.53
LITAFQ99732 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LITAFQ99732 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms