Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 REXO1L9P-201ENST00000604264 2108 ntBASIC13.75□□□□□ -0.21
DUX3Q96PT4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 MTDHP3-201ENST00000594186 672 ntBASIC13.75□□□□□ -0.21
DUX3Q96PT4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 AC148477.8-201ENST00000624298 468 ntBASIC13.75□□□□□ -0.21
DUX3Q96PT4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DUX3Q96PT4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
DUX3Q96PT4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 INTS4P1-201ENST00000438455 1935 ntBASIC13.74□□□□□ -0.21
DUX3Q96PT4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.74□□□□□ -0.21
DUX3Q96PT4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.74□□□□□ -0.21
DUX3Q96PT4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 AC093010.1-201ENST00000473625 1624 ntBASIC13.74□□□□□ -0.21
DUX3Q96PT4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
DUX3Q96PT4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.74□□□□□ -0.21
DUX3Q96PT4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DUX3Q96PT4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
DUX3Q96PT4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms