Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 HLA-L-209ENST00000420110 1011 ntBASIC13.52□□□□□ -0.25
LINC00479Q96M42 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 LINC01451-201ENST00000623792 534 ntBASIC13.52□□□□□ -0.25
LINC00479Q96M42 AC022898.2-201ENST00000616822 1312 ntBASIC13.52□□□□□ -0.25
LINC00479Q96M42 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00479Q96M42 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00479Q96M42 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00479Q96M42 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00479Q96M42 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00479Q96M42 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00479Q96M42 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00479Q96M42 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00479Q96M42 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00479Q96M42 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00479Q96M42 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LINC00479Q96M42 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 FAM197Y1-201ENST00000421178 764 ntBASIC13.51□□□□□ -0.25
LINC00479Q96M42 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 CA15P1-201ENST00000481698 905 ntBASIC13.51□□□□□ -0.25
LINC00479Q96M42 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 AC009065.1-201ENST00000564055 1225 ntBASIC13.51□□□□□ -0.25
LINC00479Q96M42 RARRES2P10-201ENST00000564312 460 ntBASIC13.51□□□□□ -0.25
LINC00479Q96M42 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 AC073648.6-201ENST00000641589 218 ntBASIC13.51□□□□□ -0.25
LINC00479Q96M42 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00479Q96M42 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LINC00479Q96M42 HYMAI-201ENST00000635591 3347 ntBASIC13.51□□□□□ -0.25
LINC00479Q96M42 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00479Q96M42 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00479Q96M42 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms