Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRIM47Q96LD4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.64■□□□□ 0.9
TRIM47Q96LD4 AL024508.2-201ENST00000607749 1894 ntBASIC20.64■□□□□ 0.9
TRIM47Q96LD4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM47Q96LD4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
TRIM47Q96LD4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM47Q96LD4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM47Q96LD4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM47Q96LD4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
TRIM47Q96LD4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM47Q96LD4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM47Q96LD4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 LAGE3P1-201ENST00000425356 484 ntBASIC20.63■□□□□ 0.89
TRIM47Q96LD4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 CYMP-203ENST00000474680 1263 ntBASIC20.63■□□□□ 0.89
TRIM47Q96LD4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 RFPL4AP1-201ENST00000530883 850 ntBASIC20.63■□□□□ 0.89
TRIM47Q96LD4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM47Q96LD4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.62■□□□□ 0.89
TRIM47Q96LD4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms