Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 MIR1233-2-201ENST00000408138 82 ntBASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 MIR1233-1-201ENST00000408722 82 ntBASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 AP003733.1-201ENST00000491725 852 ntBASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.49■□□□□ 0.71
RPGRIP1Q96KN7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 SAPCD2P3-201ENST00000455031 850 ntBASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 SLC25A1P1-201ENST00000528351 927 ntBASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 AC124067.4-201ENST00000519691 2379 ntBASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPGRIP1Q96KN7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 AF238378.1-201ENST00000526806 358 ntBASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 KRT8P3-201ENST00000519669 1449 ntBASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 MYLKP1-201ENST00000509077 1580 ntBASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPGRIP1Q96KN7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.46■□□□□ 0.71
RPGRIP1Q96KN7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms