Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 TSPY12P-201ENST00000421279 868 ntBASIC18.23■□□□□ 0.51
IFT43Q96FT9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 DUTP2-201ENST00000519164 463 ntBASIC18.23■□□□□ 0.51
IFT43Q96FT9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 AC005332.3-201ENST00000589904 676 ntBASIC18.23■□□□□ 0.51
IFT43Q96FT9 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 AC012313.10-201ENST00000623509 926 ntBASIC18.23■□□□□ 0.51
IFT43Q96FT9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
IFT43Q96FT9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
IFT43Q96FT9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 AL353692.3-201ENST00000407031 1396 ntBASIC18.22■□□□□ 0.51
IFT43Q96FT9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 AC090616.6-201ENST00000582640 721 ntBASIC18.22■□□□□ 0.51
IFT43Q96FT9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
IFT43Q96FT9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
IFT43Q96FT9 KRT18P1-202ENST00000452408 1331 ntBASIC18.22■□□□□ 0.51
IFT43Q96FT9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.21■□□□□ 0.51
IFT43Q96FT9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 AC046158.3-201ENST00000624947 2558 ntBASIC18.21■□□□□ 0.51
IFT43Q96FT9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
IFT43Q96FT9 Z83836.1-201ENST00000624605 1642 ntBASIC18.21■□□□□ 0.51
IFT43Q96FT9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms