Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 AC106820.2-201ENST00000563775 3264 ntBASIC18.69■□□□□ 0.58
TRIM11Q96F44 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.69■□□□□ 0.58
TRIM11Q96F44 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 RN7SL850P-201ENST00000579959 291 ntBASIC18.69■□□□□ 0.58
TRIM11Q96F44 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM11Q96F44 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRIM11Q96F44 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM11Q96F44 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM11Q96F44 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM11Q96F44 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM11Q96F44 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM11Q96F44 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM11Q96F44 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM11Q96F44 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
TRIM11Q96F44 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM11Q96F44 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM11Q96F44 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM11Q96F44 COX5BP2-201ENST00000392354 334 ntBASIC18.68■□□□□ 0.58
TRIM11Q96F44 RCN1P1-201ENST00000400413 996 ntBASIC18.68■□□□□ 0.58
TRIM11Q96F44 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM11Q96F44 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.68■□□□□ 0.58
TRIM11Q96F44 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM11Q96F44 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM11Q96F44 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM11Q96F44 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
TRIM11Q96F44 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM11Q96F44 PRORSD1P-202ENST00000563365 2154 ntBASIC18.68■□□□□ 0.58
TRIM11Q96F44 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
TRIM11Q96F44 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM11Q96F44 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM11Q96F44 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM11Q96F44 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM11Q96F44 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM11Q96F44 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 TMPOP1-202ENST00000424642 1267 ntBASIC18.67■□□□□ 0.58
TRIM11Q96F44 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM11Q96F44 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM11Q96F44 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM11Q96F44 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM11Q96F44 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM11Q96F44 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM11Q96F44 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM11Q96F44 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM11Q96F44 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM11Q96F44 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM11Q96F44 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM11Q96F44 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms