Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ECHDC3Q96DC8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.64■□□□□ 0.42
ECHDC3Q96DC8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ECHDC3Q96DC8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 AC026396.1-201ENST00000419388 421 ntBASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 FDX1P1-201ENST00000449115 551 ntBASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 NKAPP1-205ENST00000585790 367 ntBASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 HLA-J-201ENST00000462773 1622 ntBASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.64■□□□□ 0.41
ECHDC3Q96DC8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 AL355312.1-201ENST00000407115 2176 ntBASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 PRYP5-201ENST00000451909 266 ntBASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 AC018712.1-201ENST00000455767 687 ntBASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 AC009078.2-202ENST00000463353 338 ntBASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 SLC25A6P4-201ENST00000586535 553 ntBASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 AC133963.1-201ENST00000504166 1679 ntBASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ECHDC3Q96DC8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 KLF4P1-201ENST00000412782 1185 ntBASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 AL020989.1-201ENST00000422979 469 ntBASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 KRT18P67-201ENST00000432816 1264 ntBASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 FAM197Y8-203ENST00000450145 560 ntBASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 AC021087.4-201ENST00000563761 564 ntBASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ECHDC3Q96DC8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms