Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 AC116407.4-201ENST00000623319 1061 ntBASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 AL590326.2-201ENST00000625139 305 ntBASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 AC125634.1-201ENST00000438758 1403 ntBASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 PCDHA12-202ENST00000613593 2588 ntBASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.2■□□□□ 0.34
RHBDF1Q96CC6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 AC005336.2-201ENST00000593183 939 ntBASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 AC080080.1-201ENST00000625121 2420 ntBASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RHBDF1Q96CC6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 LYSMD4-203ENST00000378904 2122 ntBASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 AC016734.2-201ENST00000624325 1377 ntBASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 AC007967.3-201ENST00000434308 558 ntBASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 BX276092.5-203ENST00000456199 560 ntBASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 AC011840.4-201ENST00000578471 627 ntBASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 AL138831.2-201ENST00000606564 490 ntBASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 AL121672.3-201ENST00000608644 468 ntBASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.18■□□□□ 0.34
RHBDF1Q96CC6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.17■□□□□ 0.34
RHBDF1Q96CC6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.17■□□□□ 0.34
RHBDF1Q96CC6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RHBDF1Q96CC6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RHBDF1Q96CC6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms