Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
COL26A1Q96A83 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.11■□□□□ 0.33
COL26A1Q96A83 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
COL26A1Q96A83 FZD10-202ENST00000539839 3282 ntBASIC17.11■□□□□ 0.33
COL26A1Q96A83 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL26A1Q96A83 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL26A1Q96A83 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL26A1Q96A83 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL26A1Q96A83 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL26A1Q96A83 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL26A1Q96A83 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL26A1Q96A83 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 AL121912.1-201ENST00000603683 238 ntBASIC17.1■□□□□ 0.33
COL26A1Q96A83 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COL26A1Q96A83 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL26A1Q96A83 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL26A1Q96A83 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COL26A1Q96A83 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
COL26A1Q96A83 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COL26A1Q96A83 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.09■□□□□ 0.33
COL26A1Q96A83 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.09■□□□□ 0.33
COL26A1Q96A83 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
COL26A1Q96A83 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.09■□□□□ 0.33
COL26A1Q96A83 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.09■□□□□ 0.33
COL26A1Q96A83 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.09■□□□□ 0.33
COL26A1Q96A83 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.09■□□□□ 0.33
COL26A1Q96A83 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.09■□□□□ 0.33
COL26A1Q96A83 AL008721.1-201ENST00000609964 604 ntBASIC17.09■□□□□ 0.33
COL26A1Q96A83 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.09■□□□□ 0.33
COL26A1Q96A83 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.09■□□□□ 0.33
COL26A1Q96A83 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.09■□□□□ 0.33
COL26A1Q96A83 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.09■□□□□ 0.33
COL26A1Q96A83 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL26A1Q96A83 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL26A1Q96A83 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.08■□□□□ 0.33
COL26A1Q96A83 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.08■□□□□ 0.33
COL26A1Q96A83 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL26A1Q96A83 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL26A1Q96A83 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL26A1Q96A83 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COL26A1Q96A83 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COL26A1Q96A83 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.08■□□□□ 0.33
COL26A1Q96A83 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL26A1Q96A83 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.08■□□□□ 0.33
COL26A1Q96A83 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.08■□□□□ 0.33
COL26A1Q96A83 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COL26A1Q96A83 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL26A1Q96A83 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL26A1Q96A83 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.08■□□□□ 0.32
COL26A1Q96A83 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
COL26A1Q96A83 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL26A1Q96A83 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL26A1Q96A83 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.08■□□□□ 0.32
COL26A1Q96A83 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL26A1Q96A83 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL26A1Q96A83 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL26A1Q96A83 MINOS1P3-201ENST00000457048 203 ntBASIC17.08■□□□□ 0.32
COL26A1Q96A83 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms